Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
OTOP1Q7RTM1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
OTOP1Q7RTM1 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
OTOP1Q7RTM1 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
OTOP1Q7RTM1 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
OTOP1Q7RTM1 AC007274.1-201ENST00000439805 662 ntBASIC20.23■□□□□ 0.83
OTOP1Q7RTM1 AC122714.2-201ENST00000502787 707 ntBASIC20.23■□□□□ 0.83
OTOP1Q7RTM1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
OTOP1Q7RTM1 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.23■□□□□ 0.83
OTOP1Q7RTM1 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
OTOP1Q7RTM1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.23■□□□□ 0.83
OTOP1Q7RTM1 LINC00628-201ENST00000628516 1289 ntBASIC20.23■□□□□ 0.83
OTOP1Q7RTM1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.23■□□□□ 0.83
OTOP1Q7RTM1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
OTOP1Q7RTM1 ABALON-201ENST00000629058 1903 ntBASIC20.23■□□□□ 0.83
OTOP1Q7RTM1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
OTOP1Q7RTM1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.23■□□□□ 0.83
OTOP1Q7RTM1 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
OTOP1Q7RTM1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
OTOP1Q7RTM1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
OTOP1Q7RTM1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
OTOP1Q7RTM1 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.22■□□□□ 0.83
OTOP1Q7RTM1 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
OTOP1Q7RTM1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.22■□□□□ 0.83
OTOP1Q7RTM1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
OTOP1Q7RTM1 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.22■□□□□ 0.83
OTOP1Q7RTM1 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.22■□□□□ 0.83
OTOP1Q7RTM1 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
OTOP1Q7RTM1 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.22■□□□□ 0.83
OTOP1Q7RTM1 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
OTOP1Q7RTM1 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.22■□□□□ 0.83
OTOP1Q7RTM1 AC087641.1-201ENST00000557561 1021 ntBASIC20.22■□□□□ 0.83
OTOP1Q7RTM1 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
OTOP1Q7RTM1 AC092902.6-201ENST00000641783 218 ntBASIC20.22■□□□□ 0.83
OTOP1Q7RTM1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.22■□□□□ 0.83
OTOP1Q7RTM1 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.22■□□□□ 0.83
OTOP1Q7RTM1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
OTOP1Q7RTM1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
OTOP1Q7RTM1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 AC025580.3-201ENST00000617932 1424 ntBASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 RHOQP3-201ENST00000437982 621 ntBASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 AC023141.5-201ENST00000458585 616 ntBASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 AC073592.5-201ENST00000624854 528 ntBASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 AL354751.1-201ENST00000412768 1863 ntBASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.21■□□□□ 0.83
OTOP1Q7RTM1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
OTOP1Q7RTM1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
OTOP1Q7RTM1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.2■□□□□ 0.83
OTOP1Q7RTM1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
OTOP1Q7RTM1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
OTOP1Q7RTM1 AP000997.3-201ENST00000623333 2250 ntBASIC20.2■□□□□ 0.82
OTOP1Q7RTM1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
OTOP1Q7RTM1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
OTOP1Q7RTM1 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
OTOP1Q7RTM1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
OTOP1Q7RTM1 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms