Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDZRN4Q6ZMN7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDZRN4Q6ZMN7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.26■□□□□ 0.83
PDZRN4Q6ZMN7 LINC02199-201ENST00000506655 2702 ntBASIC20.26■□□□□ 0.83
PDZRN4Q6ZMN7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.25■□□□□ 0.83
PDZRN4Q6ZMN7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDZRN4Q6ZMN7 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
PDZRN4Q6ZMN7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.25■□□□□ 0.83
PDZRN4Q6ZMN7 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDZRN4Q6ZMN7 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PDZRN4Q6ZMN7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PDZRN4Q6ZMN7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.25■□□□□ 0.83
PDZRN4Q6ZMN7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDZRN4Q6ZMN7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.25■□□□□ 0.83
PDZRN4Q6ZMN7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.25■□□□□ 0.83
PDZRN4Q6ZMN7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.25■□□□□ 0.83
PDZRN4Q6ZMN7 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.25■□□□□ 0.83
PDZRN4Q6ZMN7 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDZRN4Q6ZMN7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDZRN4Q6ZMN7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDZRN4Q6ZMN7 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDZRN4Q6ZMN7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PDZRN4Q6ZMN7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDZRN4Q6ZMN7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDZRN4Q6ZMN7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PDZRN4Q6ZMN7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDZRN4Q6ZMN7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDZRN4Q6ZMN7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.25■□□□□ 0.83
PDZRN4Q6ZMN7 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDZRN4Q6ZMN7 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDZRN4Q6ZMN7 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDZRN4Q6ZMN7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
PDZRN4Q6ZMN7 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.24■□□□□ 0.83
PDZRN4Q6ZMN7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDZRN4Q6ZMN7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDZRN4Q6ZMN7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDZRN4Q6ZMN7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDZRN4Q6ZMN7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
PDZRN4Q6ZMN7 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDZRN4Q6ZMN7 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDZRN4Q6ZMN7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC20.24■□□□□ 0.83
PDZRN4Q6ZMN7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PDZRN4Q6ZMN7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDZRN4Q6ZMN7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.24■□□□□ 0.83
PDZRN4Q6ZMN7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDZRN4Q6ZMN7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.24■□□□□ 0.83
PDZRN4Q6ZMN7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDZRN4Q6ZMN7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.24■□□□□ 0.83
PDZRN4Q6ZMN7 CR769767.2-201ENST00000622735 460 ntBASIC20.24■□□□□ 0.83
PDZRN4Q6ZMN7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDZRN4Q6ZMN7 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC20.24■□□□□ 0.83
PDZRN4Q6ZMN7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.24■□□□□ 0.83
PDZRN4Q6ZMN7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.24■□□□□ 0.83
PDZRN4Q6ZMN7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.24■□□□□ 0.83
PDZRN4Q6ZMN7 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDZRN4Q6ZMN7 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDZRN4Q6ZMN7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
PDZRN4Q6ZMN7 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDZRN4Q6ZMN7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PDZRN4Q6ZMN7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.24■□□□□ 0.83
PDZRN4Q6ZMN7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDZRN4Q6ZMN7 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 AC092850.2-201ENST00000623821 2697 ntBASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 AL671277.2-201ENST00000458060 996 ntBASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 FUK-207ENST00000571514 3054 ntTSL 2 BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.23■□□□□ 0.83
PDZRN4Q6ZMN7 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms