Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 RCN1P2-201ENST00000398357 915 ntBASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 AC122714.2-201ENST00000502787 707 ntBASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DQA1Q5Y7H0 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
HLA-DQA1Q5Y7H0 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 IGHV3-52-201ENST00000519770 353 ntBASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 AC111152.3-201ENST00000569699 673 ntBASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 MIR5100-201ENST00000579544 119 ntBASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 AC012313.10-201ENST00000623509 926 ntBASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HLA-DQA1Q5Y7H0 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DQA1Q5Y7H0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DQA1Q5Y7H0 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-DQA1Q5Y7H0 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-DQA1Q5Y7H0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DQA1Q5Y7H0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DQA1Q5Y7H0 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DQA1Q5Y7H0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DQA1Q5Y7H0 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
HLA-DQA1Q5Y7H0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DQA1Q5Y7H0 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DQA1Q5Y7H0 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DQA1Q5Y7H0 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DQA1Q5Y7H0 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DQA1Q5Y7H0 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
HLA-DQA1Q5Y7H0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-DQA1Q5Y7H0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-DQA1Q5Y7H0 KRT18P31-201ENST00000506277 1292 ntBASIC16.38■□□□□ 0.21
HLA-DQA1Q5Y7H0 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.38■□□□□ 0.21
HLA-DQA1Q5Y7H0 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-DQA1Q5Y7H0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.38■□□□□ 0.21
HLA-DQA1Q5Y7H0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.38■□□□□ 0.21
HLA-DQA1Q5Y7H0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.38■□□□□ 0.21
HLA-DQA1Q5Y7H0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.38■□□□□ 0.21
HLA-DQA1Q5Y7H0 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HLA-DQA1Q5Y7H0 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms