Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RIF1Q5UIP0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RIF1Q5UIP0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.86■□□□□ 0.29
RIF1Q5UIP0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RIF1Q5UIP0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RIF1Q5UIP0 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RIF1Q5UIP0 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.86■□□□□ 0.29
RIF1Q5UIP0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RIF1Q5UIP0 MYCLP1-201ENST00000372451 1075 ntBASIC16.86■□□□□ 0.29
RIF1Q5UIP0 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RIF1Q5UIP0 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.86■□□□□ 0.29
RIF1Q5UIP0 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
RIF1Q5UIP0 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RIF1Q5UIP0 ACTG1P4-201ENST00000425123 1122 ntBASIC16.86■□□□□ 0.29
RIF1Q5UIP0 AC009477.1-201ENST00000452936 217 ntBASIC16.86■□□□□ 0.29
RIF1Q5UIP0 RN7SL837P-201ENST00000463010 287 ntBASIC16.86■□□□□ 0.29
RIF1Q5UIP0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RIF1Q5UIP0 RN7SL190P-201ENST00000582519 257 ntBASIC16.86■□□□□ 0.29
RIF1Q5UIP0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RIF1Q5UIP0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.86■□□□□ 0.29
RIF1Q5UIP0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
RIF1Q5UIP0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RIF1Q5UIP0 AL049812.1-201ENST00000432563 2267 ntBASIC16.86■□□□□ 0.29
RIF1Q5UIP0 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC16.86■□□□□ 0.29
RIF1Q5UIP0 ESPNP-201ENST00000270691 2015 ntBASIC16.86■□□□□ 0.29
RIF1Q5UIP0 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
RIF1Q5UIP0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RIF1Q5UIP0 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.86■□□□□ 0.29
RIF1Q5UIP0 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.86■□□□□ 0.29
RIF1Q5UIP0 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.86■□□□□ 0.29
RIF1Q5UIP0 ALG1L8P-201ENST00000533887 760 ntBASIC16.86■□□□□ 0.29
RIF1Q5UIP0 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.86■□□□□ 0.29
RIF1Q5UIP0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RIF1Q5UIP0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RIF1Q5UIP0 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RIF1Q5UIP0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.85■□□□□ 0.29
RIF1Q5UIP0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.85■□□□□ 0.29
RIF1Q5UIP0 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RIF1Q5UIP0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RIF1Q5UIP0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RIF1Q5UIP0 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RIF1Q5UIP0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RIF1Q5UIP0 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RIF1Q5UIP0 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RIF1Q5UIP0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RIF1Q5UIP0 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RIF1Q5UIP0 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RIF1Q5UIP0 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.85■□□□□ 0.29
RIF1Q5UIP0 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.85■□□□□ 0.29
RIF1Q5UIP0 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.85■□□□□ 0.29
RIF1Q5UIP0 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.85■□□□□ 0.29
RIF1Q5UIP0 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.85■□□□□ 0.29
RIF1Q5UIP0 AC009407.1-201ENST00000568958 598 ntBASIC16.85■□□□□ 0.29
RIF1Q5UIP0 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.85■□□□□ 0.29
RIF1Q5UIP0 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.85■□□□□ 0.29
RIF1Q5UIP0 AL139099.5-201ENST00000635274 300 ntBASIC16.85■□□□□ 0.29
RIF1Q5UIP0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RIF1Q5UIP0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.85■□□□□ 0.29
RIF1Q5UIP0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RIF1Q5UIP0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.85■□□□□ 0.29
RIF1Q5UIP0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RIF1Q5UIP0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
RIF1Q5UIP0 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.85■□□□□ 0.29
RIF1Q5UIP0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RIF1Q5UIP0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RIF1Q5UIP0 AC007389.4-201ENST00000454674 793 ntBASIC16.85■□□□□ 0.29
RIF1Q5UIP0 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.85■□□□□ 0.29
RIF1Q5UIP0 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
RIF1Q5UIP0 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.85■□□□□ 0.29
RIF1Q5UIP0 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.85■□□□□ 0.29
RIF1Q5UIP0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
RIF1Q5UIP0 KRT8P44-201ENST00000441609 1350 ntBASIC16.84■□□□□ 0.29
RIF1Q5UIP0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RIF1Q5UIP0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RIF1Q5UIP0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RIF1Q5UIP0 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RIF1Q5UIP0 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.84■□□□□ 0.29
RIF1Q5UIP0 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.84■□□□□ 0.29
RIF1Q5UIP0 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.84■□□□□ 0.29
RIF1Q5UIP0 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RIF1Q5UIP0 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RIF1Q5UIP0 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.84■□□□□ 0.29
RIF1Q5UIP0 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.84■□□□□ 0.29
RIF1Q5UIP0 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RIF1Q5UIP0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RIF1Q5UIP0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.84■□□□□ 0.29
RIF1Q5UIP0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RIF1Q5UIP0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RIF1Q5UIP0 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RIF1Q5UIP0 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.84■□□□□ 0.29
RIF1Q5UIP0 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.84■□□□□ 0.29
RIF1Q5UIP0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RIF1Q5UIP0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RIF1Q5UIP0 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RIF1Q5UIP0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.84■□□□□ 0.29
RIF1Q5UIP0 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RIF1Q5UIP0 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RIF1Q5UIP0 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RIF1Q5UIP0 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RIF1Q5UIP0 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms