Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSL3PQ5NE16 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSL3PQ5NE16 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSL3PQ5NE16 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.28■□□□□ 0.36
CTSL3PQ5NE16 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CTSL3PQ5NE16 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSL3PQ5NE16 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSL3PQ5NE16 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.28■□□□□ 0.36
CTSL3PQ5NE16 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSL3PQ5NE16 SLC25A1P3-201ENST00000395415 828 ntBASIC17.28■□□□□ 0.36
CTSL3PQ5NE16 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTSL3PQ5NE16 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.28■□□□□ 0.36
CTSL3PQ5NE16 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.28■□□□□ 0.36
CTSL3PQ5NE16 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.28■□□□□ 0.36
CTSL3PQ5NE16 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.28■□□□□ 0.36
CTSL3PQ5NE16 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.28■□□□□ 0.36
CTSL3PQ5NE16 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CTSL3PQ5NE16 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CTSL3PQ5NE16 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSL3PQ5NE16 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.28■□□□□ 0.36
CTSL3PQ5NE16 AC046185.3-201ENST00000623228 1824 ntBASIC17.28■□□□□ 0.36
CTSL3PQ5NE16 AC132938.5-201ENST00000624980 1813 ntBASIC17.28■□□□□ 0.36
CTSL3PQ5NE16 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSL3PQ5NE16 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CTSL3PQ5NE16 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.28■□□□□ 0.36
CTSL3PQ5NE16 AC020916.1-201ENST00000587762 1774 ntBASIC17.28■□□□□ 0.36
CTSL3PQ5NE16 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTSL3PQ5NE16 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTSL3PQ5NE16 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTSL3PQ5NE16 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTSL3PQ5NE16 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.27■□□□□ 0.36
CTSL3PQ5NE16 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CTSL3PQ5NE16 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTSL3PQ5NE16 AC116353.5-201ENST00000638148 1699 ntBASIC17.27■□□□□ 0.36
CTSL3PQ5NE16 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTSL3PQ5NE16 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CTSL3PQ5NE16 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CTSL3PQ5NE16 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CTSL3PQ5NE16 NUS1P2-201ENST00000417358 873 ntBASIC17.27■□□□□ 0.36
CTSL3PQ5NE16 POM121L3P-201ENST00000419331 1163 ntBASIC17.27■□□□□ 0.36
CTSL3PQ5NE16 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CTSL3PQ5NE16 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.27■□□□□ 0.36
CTSL3PQ5NE16 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CTSL3PQ5NE16 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.27■□□□□ 0.36
CTSL3PQ5NE16 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.27■□□□□ 0.36
CTSL3PQ5NE16 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.27■□□□□ 0.36
CTSL3PQ5NE16 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.27■□□□□ 0.36
CTSL3PQ5NE16 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTSL3PQ5NE16 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
CTSL3PQ5NE16 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CTSL3PQ5NE16 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CTSL3PQ5NE16 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.27■□□□□ 0.35
CTSL3PQ5NE16 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CTSL3PQ5NE16 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CTSL3PQ5NE16 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.27■□□□□ 0.35
CTSL3PQ5NE16 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CTSL3PQ5NE16 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTSL3PQ5NE16 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.26■□□□□ 0.35
CTSL3PQ5NE16 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.26■□□□□ 0.35
CTSL3PQ5NE16 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CTSL3PQ5NE16 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSL3PQ5NE16 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSL3PQ5NE16 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CTSL3PQ5NE16 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTSL3PQ5NE16 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSL3PQ5NE16 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSL3PQ5NE16 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CTSL3PQ5NE16 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.26■□□□□ 0.35
CTSL3PQ5NE16 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.26■□□□□ 0.35
CTSL3PQ5NE16 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.26■□□□□ 0.35
CTSL3PQ5NE16 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.26■□□□□ 0.35
CTSL3PQ5NE16 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.26■□□□□ 0.35
CTSL3PQ5NE16 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.26■□□□□ 0.35
CTSL3PQ5NE16 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.26■□□□□ 0.35
CTSL3PQ5NE16 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTSL3PQ5NE16 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSL3PQ5NE16 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.26■□□□□ 0.35
CTSL3PQ5NE16 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTSL3PQ5NE16 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
CTSL3PQ5NE16 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSL3PQ5NE16 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSL3PQ5NE16 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSL3PQ5NE16 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSL3PQ5NE16 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CTSL3PQ5NE16 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSL3PQ5NE16 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSL3PQ5NE16 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTSL3PQ5NE16 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CTSL3PQ5NE16 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTSL3PQ5NE16 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTSL3PQ5NE16 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
CTSL3PQ5NE16 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CTSL3PQ5NE16 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.25■□□□□ 0.35
CTSL3PQ5NE16 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTSL3PQ5NE16 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.25■□□□□ 0.35
CTSL3PQ5NE16 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTSL3PQ5NE16 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTSL3PQ5NE16 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTSL3PQ5NE16 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTSL3PQ5NE16 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms