Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.14■□□□□ 0.81
USH1GQ495M9 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.14■□□□□ 0.81
USH1GQ495M9 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
USH1GQ495M9 AC117500.6-201ENST00000624871 588 ntBASIC20.14■□□□□ 0.81
USH1GQ495M9 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
USH1GQ495M9 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.14■□□□□ 0.81
USH1GQ495M9 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
USH1GQ495M9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
USH1GQ495M9 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
USH1GQ495M9 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.14■□□□□ 0.81
USH1GQ495M9 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
USH1GQ495M9 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USH1GQ495M9 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USH1GQ495M9 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.13■□□□□ 0.81
USH1GQ495M9 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USH1GQ495M9 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
USH1GQ495M9 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USH1GQ495M9 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USH1GQ495M9 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USH1GQ495M9 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.13■□□□□ 0.81
USH1GQ495M9 PMS2P1-201ENST00000431037 1228 ntBASIC20.13■□□□□ 0.81
USH1GQ495M9 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.13■□□□□ 0.81
USH1GQ495M9 RNA5SP415-201ENST00000517246 115 ntBASIC20.13■□□□□ 0.81
USH1GQ495M9 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.13■□□□□ 0.81
USH1GQ495M9 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.13■□□□□ 0.81
USH1GQ495M9 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USH1GQ495M9 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USH1GQ495M9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
USH1GQ495M9 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.13■□□□□ 0.81
USH1GQ495M9 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
USH1GQ495M9 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USH1GQ495M9 AC007613.1-201ENST00000572811 2597 ntBASIC20.13■□□□□ 0.81
USH1GQ495M9 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USH1GQ495M9 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
USH1GQ495M9 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USH1GQ495M9 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USH1GQ495M9 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.12■□□□□ 0.81
USH1GQ495M9 AC009336.1-201ENST00000608941 1553 ntBASIC20.12■□□□□ 0.81
USH1GQ495M9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USH1GQ495M9 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
USH1GQ495M9 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
USH1GQ495M9 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USH1GQ495M9 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USH1GQ495M9 ZNF259P1-201ENST00000407656 1365 ntBASIC20.12■□□□□ 0.81
USH1GQ495M9 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.12■□□□□ 0.81
USH1GQ495M9 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
USH1GQ495M9 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USH1GQ495M9 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.12■□□□□ 0.81
USH1GQ495M9 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
USH1GQ495M9 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USH1GQ495M9 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.12■□□□□ 0.81
USH1GQ495M9 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
USH1GQ495M9 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.12■□□□□ 0.81
USH1GQ495M9 POLD2P1-201ENST00000511220 997 ntBASIC20.12■□□□□ 0.81
USH1GQ495M9 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.12■□□□□ 0.81
USH1GQ495M9 AL356488.2-201ENST00000602755 427 ntBASIC20.12■□□□□ 0.81
USH1GQ495M9 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.12■□□□□ 0.81
USH1GQ495M9 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
USH1GQ495M9 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
USH1GQ495M9 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
USH1GQ495M9 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USH1GQ495M9 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USH1GQ495M9 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USH1GQ495M9 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USH1GQ495M9 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
USH1GQ495M9 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.12■□□□□ 0.81
USH1GQ495M9 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.12■□□□□ 0.81
USH1GQ495M9 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
USH1GQ495M9 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.12■□□□□ 0.81
USH1GQ495M9 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
USH1GQ495M9 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.11■□□□□ 0.81
USH1GQ495M9 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
USH1GQ495M9 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USH1GQ495M9 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USH1GQ495M9 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USH1GQ495M9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
USH1GQ495M9 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
USH1GQ495M9 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
USH1GQ495M9 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.11■□□□□ 0.81
USH1GQ495M9 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USH1GQ495M9 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USH1GQ495M9 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
USH1GQ495M9 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USH1GQ495M9 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USH1GQ495M9 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.11■□□□□ 0.81
USH1GQ495M9 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.11■□□□□ 0.81
USH1GQ495M9 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
USH1GQ495M9 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.11■□□□□ 0.81
USH1GQ495M9 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
USH1GQ495M9 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.11■□□□□ 0.81
USH1GQ495M9 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.11■□□□□ 0.81
USH1GQ495M9 AC006557.2-201ENST00000592985 1240 ntBASIC20.11■□□□□ 0.81
USH1GQ495M9 AL589182.2-201ENST00000619332 1049 ntBASIC20.11■□□□□ 0.81
USH1GQ495M9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.11■□□□□ 0.81
USH1GQ495M9 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.11■□□□□ 0.81
USH1GQ495M9 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
USH1GQ495M9 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
USH1GQ495M9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
USH1GQ495M9 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
USH1GQ495M9 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms