Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX4Q33E94 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFX4Q33E94 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
RFX4Q33E94 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX4Q33E94 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.36■□□□□ 0.21
RFX4Q33E94 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX4Q33E94 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX4Q33E94 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RFX4Q33E94 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX4Q33E94 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFX4Q33E94 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFX4Q33E94 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
RFX4Q33E94 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.36■□□□□ 0.21
RFX4Q33E94 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX4Q33E94 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RFX4Q33E94 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RFX4Q33E94 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RFX4Q33E94 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RFX4Q33E94 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFX4Q33E94 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFX4Q33E94 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX4Q33E94 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX4Q33E94 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX4Q33E94 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX4Q33E94 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFX4Q33E94 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX4Q33E94 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX4Q33E94 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX4Q33E94 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX4Q33E94 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX4Q33E94 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.35■□□□□ 0.21
RFX4Q33E94 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFX4Q33E94 MIR1238-201ENST00000408483 83 ntBASIC16.35■□□□□ 0.21
RFX4Q33E94 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.35■□□□□ 0.21
RFX4Q33E94 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.35■□□□□ 0.21
RFX4Q33E94 AC008550.1-201ENST00000511500 884 ntBASIC16.35■□□□□ 0.21
RFX4Q33E94 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.35■□□□□ 0.21
RFX4Q33E94 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
RFX4Q33E94 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.35■□□□□ 0.21
RFX4Q33E94 C2orf69P3-201ENST00000565542 1120 ntBASIC16.35■□□□□ 0.21
RFX4Q33E94 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.35■□□□□ 0.21
RFX4Q33E94 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFX4Q33E94 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.35■□□□□ 0.21
RFX4Q33E94 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.35■□□□□ 0.21
RFX4Q33E94 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.35■□□□□ 0.21
RFX4Q33E94 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RFX4Q33E94 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RFX4Q33E94 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
RFX4Q33E94 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.35■□□□□ 0.21
RFX4Q33E94 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.35■□□□□ 0.21
RFX4Q33E94 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.35■□□□□ 0.21
RFX4Q33E94 PCDH8P1-201ENST00000428983 2773 ntBASIC16.35■□□□□ 0.21
RFX4Q33E94 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFX4Q33E94 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RFX4Q33E94 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.35■□□□□ 0.21
RFX4Q33E94 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.35■□□□□ 0.21
RFX4Q33E94 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFX4Q33E94 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFX4Q33E94 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.34■□□□□ 0.21
RFX4Q33E94 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.34■□□□□ 0.21
RFX4Q33E94 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RFX4Q33E94 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.34■□□□□ 0.21
RFX4Q33E94 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFX4Q33E94 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFX4Q33E94 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.34■□□□□ 0.21
RFX4Q33E94 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RFX4Q33E94 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFX4Q33E94 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFX4Q33E94 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.34■□□□□ 0.21
RFX4Q33E94 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.34■□□□□ 0.21
RFX4Q33E94 TSPY14P-201ENST00000303979 915 ntBASIC16.34■□□□□ 0.21
RFX4Q33E94 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFX4Q33E94 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFX4Q33E94 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFX4Q33E94 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.34■□□□□ 0.21
RFX4Q33E94 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.34■□□□□ 0.21
RFX4Q33E94 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.34■□□□□ 0.21
RFX4Q33E94 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.34■□□□□ 0.21
RFX4Q33E94 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFX4Q33E94 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFX4Q33E94 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFX4Q33E94 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFX4Q33E94 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFX4Q33E94 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFX4Q33E94 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFX4Q33E94 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFX4Q33E94 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFX4Q33E94 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.34■□□□□ 0.21
RFX4Q33E94 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFX4Q33E94 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFX4Q33E94 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.34■□□□□ 0.21
RFX4Q33E94 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFX4Q33E94 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
RFX4Q33E94 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFX4Q33E94 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
RFX4Q33E94 AC009949.1-201ENST00000623048 1830 ntBASIC16.33■□□□□ 0.21
RFX4Q33E94 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RFX4Q33E94 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
RFX4Q33E94 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RFX4Q33E94 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms