Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.39■□□□□ 0.86
SHROOM1Q2M3G4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SHROOM1Q2M3G4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.39■□□□□ 0.86
SHROOM1Q2M3G4 AL135999.2-201ENST00000622438 1686 ntBASIC20.39■□□□□ 0.86
SHROOM1Q2M3G4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.39■□□□□ 0.85
SHROOM1Q2M3G4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.39■□□□□ 0.85
SHROOM1Q2M3G4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.39■□□□□ 0.85
SHROOM1Q2M3G4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SHROOM1Q2M3G4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SHROOM1Q2M3G4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SHROOM1Q2M3G4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SHROOM1Q2M3G4 AC211486.1-202ENST00000416371 468 ntBASIC20.39■□□□□ 0.85
SHROOM1Q2M3G4 PMS2P2-201ENST00000425039 1128 ntBASIC20.39■□□□□ 0.85
SHROOM1Q2M3G4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.39■□□□□ 0.85
SHROOM1Q2M3G4 AC211476.1-201ENST00000503899 468 ntBASIC20.39■□□□□ 0.85
SHROOM1Q2M3G4 YBX1P5-201ENST00000509441 847 ntBASIC20.39■□□□□ 0.85
SHROOM1Q2M3G4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SHROOM1Q2M3G4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
SHROOM1Q2M3G4 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SHROOM1Q2M3G4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.39■□□□□ 0.85
SHROOM1Q2M3G4 AC004877.2-201ENST00000623941 599 ntBASIC20.39■□□□□ 0.85
SHROOM1Q2M3G4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SHROOM1Q2M3G4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SHROOM1Q2M3G4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SHROOM1Q2M3G4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
SHROOM1Q2M3G4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SHROOM1Q2M3G4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SHROOM1Q2M3G4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.39■□□□□ 0.85
SHROOM1Q2M3G4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SHROOM1Q2M3G4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SHROOM1Q2M3G4 AC002310.6-201ENST00000624451 1377 ntBASIC20.38■□□□□ 0.85
SHROOM1Q2M3G4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SHROOM1Q2M3G4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SHROOM1Q2M3G4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SHROOM1Q2M3G4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SHROOM1Q2M3G4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SHROOM1Q2M3G4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SHROOM1Q2M3G4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SHROOM1Q2M3G4 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.38■□□□□ 0.85
SHROOM1Q2M3G4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SHROOM1Q2M3G4 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.38■□□□□ 0.85
SHROOM1Q2M3G4 MRPL20P1-201ENST00000400819 433 ntBASIC20.38■□□□□ 0.85
SHROOM1Q2M3G4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.38■□□□□ 0.85
SHROOM1Q2M3G4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.38■□□□□ 0.85
SHROOM1Q2M3G4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.38■□□□□ 0.85
SHROOM1Q2M3G4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
SHROOM1Q2M3G4 AC027796.2-201ENST00000575326 344 ntBASIC20.38■□□□□ 0.85
SHROOM1Q2M3G4 AC010654.1-201ENST00000615722 808 ntBASIC20.38■□□□□ 0.85
SHROOM1Q2M3G4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SHROOM1Q2M3G4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 AP002414.1-201ENST00000391405 1147 ntBASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 HMGN1P19-201ENST00000436976 333 ntBASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 AC005829.1-201ENST00000570002 483 ntBASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.37■□□□□ 0.85
SHROOM1Q2M3G4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHROOM1Q2M3G4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.36■□□□□ 0.85
SHROOM1Q2M3G4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHROOM1Q2M3G4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.36■□□□□ 0.85
SHROOM1Q2M3G4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.36■□□□□ 0.85
SHROOM1Q2M3G4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.36■□□□□ 0.85
SHROOM1Q2M3G4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHROOM1Q2M3G4 AP006288.1-201ENST00000446065 395 ntBASIC20.36■□□□□ 0.85
SHROOM1Q2M3G4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.36■□□□□ 0.85
SHROOM1Q2M3G4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.36■□□□□ 0.85
SHROOM1Q2M3G4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
SHROOM1Q2M3G4 KRT19P2-202ENST00000557173 1012 ntBASIC20.36■□□□□ 0.85
SHROOM1Q2M3G4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.36■□□□□ 0.85
SHROOM1Q2M3G4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.36■□□□□ 0.85
SHROOM1Q2M3G4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.36■□□□□ 0.85
SHROOM1Q2M3G4 AL354751.1-201ENST00000412768 1863 ntBASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms