Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KCNA1Q09470 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KCNA1Q09470 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KCNA1Q09470 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KCNA1Q09470 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.28■□□□□ 0.68
KCNA1Q09470 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.28■□□□□ 0.68
KCNA1Q09470 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.28■□□□□ 0.68
KCNA1Q09470 AP001269.4-201ENST00000609611 512 ntBASIC19.28■□□□□ 0.68
KCNA1Q09470 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KCNA1Q09470 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
KCNA1Q09470 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KCNA1Q09470 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
KCNA1Q09470 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KCNA1Q09470 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.28■□□□□ 0.68
KCNA1Q09470 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.28■□□□□ 0.68
KCNA1Q09470 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KCNA1Q09470 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KCNA1Q09470 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
KCNA1Q09470 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KCNA1Q09470 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KCNA1Q09470 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KCNA1Q09470 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KCNA1Q09470 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KCNA1Q09470 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.27■□□□□ 0.68
KCNA1Q09470 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
KCNA1Q09470 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.27■□□□□ 0.68
KCNA1Q09470 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KCNA1Q09470 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KCNA1Q09470 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.27■□□□□ 0.68
KCNA1Q09470 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
KCNA1Q09470 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KCNA1Q09470 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.27■□□□□ 0.68
KCNA1Q09470 AL139327.4-201ENST00000612362 153 ntBASIC19.27■□□□□ 0.68
KCNA1Q09470 AP000867.4-201ENST00000641616 219 ntBASIC19.27■□□□□ 0.68
KCNA1Q09470 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
KCNA1Q09470 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KCNA1Q09470 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
KCNA1Q09470 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
KCNA1Q09470 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
KCNA1Q09470 PMPCAP1-201ENST00000508114 1576 ntBASIC19.27■□□□□ 0.67
KCNA1Q09470 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
KCNA1Q09470 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
KCNA1Q09470 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
KCNA1Q09470 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.27■□□□□ 0.67
KCNA1Q09470 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.26■□□□□ 0.67
KCNA1Q09470 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.26■□□□□ 0.67
KCNA1Q09470 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.26■□□□□ 0.67
KCNA1Q09470 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
KCNA1Q09470 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KCNA1Q09470 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNA1Q09470 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNA1Q09470 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNA1Q09470 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNA1Q09470 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.26■□□□□ 0.67
KCNA1Q09470 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KCNA1Q09470 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
KCNA1Q09470 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.26■□□□□ 0.67
KCNA1Q09470 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.26■□□□□ 0.67
KCNA1Q09470 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.26■□□□□ 0.67
KCNA1Q09470 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.26■□□□□ 0.67
KCNA1Q09470 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.26■□□□□ 0.67
KCNA1Q09470 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.26■□□□□ 0.67
KCNA1Q09470 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.26■□□□□ 0.67
KCNA1Q09470 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.26■□□□□ 0.67
KCNA1Q09470 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
KCNA1Q09470 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
KCNA1Q09470 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.26■□□□□ 0.67
KCNA1Q09470 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.26■□□□□ 0.67
KCNA1Q09470 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KCNA1Q09470 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.26■□□□□ 0.67
KCNA1Q09470 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KCNA1Q09470 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
KCNA1Q09470 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNA1Q09470 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
KCNA1Q09470 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KCNA1Q09470 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
KCNA1Q09470 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNA1Q09470 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNA1Q09470 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.25■□□□□ 0.67
KCNA1Q09470 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNA1Q09470 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.25■□□□□ 0.67
KCNA1Q09470 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNA1Q09470 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.25■□□□□ 0.67
KCNA1Q09470 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNA1Q09470 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
KCNA1Q09470 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KCNA1Q09470 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNA1Q09470 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KCNA1Q09470 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.25■□□□□ 0.67
KCNA1Q09470 AC091304.2-201ENST00000564639 760 ntBASIC19.25■□□□□ 0.67
KCNA1Q09470 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
KCNA1Q09470 STK25P1-201ENST00000585406 838 ntBASIC19.25■□□□□ 0.67
KCNA1Q09470 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.25■□□□□ 0.67
KCNA1Q09470 AL121772.3-201ENST00000610840 674 ntBASIC19.25■□□□□ 0.67
KCNA1Q09470 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KCNA1Q09470 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
KCNA1Q09470 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
KCNA1Q09470 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNA1Q09470 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
KCNA1Q09470 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms