Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL16A1Q07092 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
COL16A1Q07092 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL16A1Q07092 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC23.37■■□□□ 1.33
COL16A1Q07092 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
COL16A1Q07092 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL16A1Q07092 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
COL16A1Q07092 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
COL16A1Q07092 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
COL16A1Q07092 AP006294.1-201ENST00000415407 339 ntBASIC23.37■■□□□ 1.33
COL16A1Q07092 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC23.37■■□□□ 1.33
COL16A1Q07092 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC23.37■■□□□ 1.33
COL16A1Q07092 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.37■■□□□ 1.33
COL16A1Q07092 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC23.36■■□□□ 1.33
COL16A1Q07092 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC23.36■■□□□ 1.33
COL16A1Q07092 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL16A1Q07092 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL16A1Q07092 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL16A1Q07092 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
COL16A1Q07092 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC23.36■■□□□ 1.33
COL16A1Q07092 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC23.36■■□□□ 1.33
COL16A1Q07092 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
COL16A1Q07092 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC23.36■■□□□ 1.33
COL16A1Q07092 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC23.36■■□□□ 1.33
COL16A1Q07092 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
COL16A1Q07092 PACS1-203ENST00000524815 628 ntTSL 4 BASIC23.36■■□□□ 1.33
COL16A1Q07092 STOM-203ENST00000538954 1257 ntTSL 5 BASIC23.36■■□□□ 1.33
COL16A1Q07092 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL16A1Q07092 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC23.36■■□□□ 1.33
COL16A1Q07092 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL16A1Q07092 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL16A1Q07092 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
COL16A1Q07092 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL16A1Q07092 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
COL16A1Q07092 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC23.35■■□□□ 1.33
COL16A1Q07092 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC23.35■■□□□ 1.33
COL16A1Q07092 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL16A1Q07092 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL16A1Q07092 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC23.35■■□□□ 1.33
COL16A1Q07092 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL16A1Q07092 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC23.35■■□□□ 1.33
COL16A1Q07092 AC007967.4-201ENST00000614700 386 ntBASIC23.35■■□□□ 1.33
COL16A1Q07092 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC23.35■■□□□ 1.33
COL16A1Q07092 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
COL16A1Q07092 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL16A1Q07092 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
COL16A1Q07092 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC23.34■■□□□ 1.33
COL16A1Q07092 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
COL16A1Q07092 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COL16A1Q07092 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL16A1Q07092 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COL16A1Q07092 MYCLP1-201ENST00000372451 1075 ntBASIC23.34■■□□□ 1.33
COL16A1Q07092 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
COL16A1Q07092 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC23.34■■□□□ 1.33
COL16A1Q07092 KRT17P8-201ENST00000540749 863 ntBASIC23.34■■□□□ 1.33
COL16A1Q07092 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC23.34■■□□□ 1.33
COL16A1Q07092 MPI-209ENST00000564003 1195 ntTSL 2 BASIC23.34■■□□□ 1.33
COL16A1Q07092 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC23.34■■□□□ 1.33
COL16A1Q07092 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL16A1Q07092 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC23.34■■□□□ 1.33
COL16A1Q07092 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC23.34■■□□□ 1.33
COL16A1Q07092 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC23.34■■□□□ 1.33
COL16A1Q07092 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COL16A1Q07092 MIR346-201ENST00000362234 95 ntBASIC23.33■■□□□ 1.33
COL16A1Q07092 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC23.33■■□□□ 1.33
COL16A1Q07092 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
COL16A1Q07092 AC022210.1-201ENST00000449856 793 ntBASIC23.33■■□□□ 1.33
COL16A1Q07092 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC23.33■■□□□ 1.33
COL16A1Q07092 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC23.33■■□□□ 1.33
COL16A1Q07092 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
COL16A1Q07092 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC23.33■■□□□ 1.33
COL16A1Q07092 APOC4-201ENST00000591600 348 ntTSL 3 BASIC23.33■■□□□ 1.33
COL16A1Q07092 RNA5-8SN1-201ENST00000610460 153 ntBASIC23.33■■□□□ 1.33
COL16A1Q07092 RNA5-8SN5-202ENST00000612463 153 ntBASIC23.33■■□□□ 1.33
COL16A1Q07092 RNA5-8SN4-201ENST00000613359 153 ntBASIC23.33■■□□□ 1.33
COL16A1Q07092 RNA5-8SN5-201ENST00000619471 153 ntBASIC23.33■■□□□ 1.33
COL16A1Q07092 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
COL16A1Q07092 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC23.33■■□□□ 1.33
COL16A1Q07092 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL16A1Q07092 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC23.33■■□□□ 1.33
COL16A1Q07092 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC23.33■■□□□ 1.33
COL16A1Q07092 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC23.33■■□□□ 1.33
COL16A1Q07092 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC23.33■■□□□ 1.33
COL16A1Q07092 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL16A1Q07092 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC23.33■■□□□ 1.32
COL16A1Q07092 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
COL16A1Q07092 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
COL16A1Q07092 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
COL16A1Q07092 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC23.33■■□□□ 1.32
COL16A1Q07092 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC23.33■■□□□ 1.32
COL16A1Q07092 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
COL16A1Q07092 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC23.33■■□□□ 1.32
COL16A1Q07092 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
COL16A1Q07092 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
COL16A1Q07092 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC23.33■■□□□ 1.32
COL16A1Q07092 AC027307.2-201ENST00000591252 911 ntBASIC23.33■■□□□ 1.32
COL16A1Q07092 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
COL16A1Q07092 AC009949.1-201ENST00000623048 1830 ntBASIC23.32■■□□□ 1.32
COL16A1Q07092 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL16A1Q07092 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms