Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AP000550.4-202ENST00000639755 178 ntBASIC14.19□□□□□ -0.14
CX3CL1P78423 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.19□□□□□ -0.14
CX3CL1P78423 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.19□□□□□ -0.14
CX3CL1P78423 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.19□□□□□ -0.14
CX3CL1P78423 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CX3CL1P78423 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CL1P78423 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CX3CL1P78423 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CX3CL1P78423 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CL1P78423 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CL1P78423 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CL1P78423 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.19□□□□□ -0.14
CX3CL1P78423 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CX3CL1P78423 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC14.18□□□□□ -0.14
CX3CL1P78423 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CL1P78423 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.18□□□□□ -0.14
CX3CL1P78423 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CL1P78423 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CL1P78423 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CL1P78423 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
CX3CL1P78423 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CL1P78423 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.18□□□□□ -0.14
CX3CL1P78423 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.18□□□□□ -0.14
CX3CL1P78423 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CL1P78423 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CL1P78423 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CL1P78423 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CX3CL1P78423 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CL1P78423 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CX3CL1P78423 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.18□□□□□ -0.14
CX3CL1P78423 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CL1P78423 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CL1P78423 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.18□□□□□ -0.14
CX3CL1P78423 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.18□□□□□ -0.14
CX3CL1P78423 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CL1P78423 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CL1P78423 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.18□□□□□ -0.14
CX3CL1P78423 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.18□□□□□ -0.14
CX3CL1P78423 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.18□□□□□ -0.14
CX3CL1P78423 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CX3CL1P78423 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.18□□□□□ -0.14
CX3CL1P78423 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CL1P78423 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CL1P78423 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CL1P78423 AC016734.2-201ENST00000624325 1377 ntBASIC14.18□□□□□ -0.14
CX3CL1P78423 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CL1P78423 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CL1P78423 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CL1P78423 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CX3CL1P78423 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CL1P78423 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CL1P78423 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.18□□□□□ -0.14
CX3CL1P78423 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.18□□□□□ -0.14
CX3CL1P78423 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CX3CL1P78423 AL139384.1-201ENST00000612143 3047 ntBASIC14.17□□□□□ -0.14
CX3CL1P78423 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CL1P78423 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.17□□□□□ -0.14
CX3CL1P78423 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CL1P78423 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CL1P78423 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CL1P78423 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CL1P78423 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CL1P78423 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CL1P78423 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.17□□□□□ -0.14
CX3CL1P78423 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CX3CL1P78423 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CX3CL1P78423 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CX3CL1P78423 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CL1P78423 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CL1P78423 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CL1P78423 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CL1P78423 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CL1P78423 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CL1P78423 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.17□□□□□ -0.14
CX3CL1P78423 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.17□□□□□ -0.14
CX3CL1P78423 RN7SL606P-201ENST00000472779 293 ntBASIC14.17□□□□□ -0.14
CX3CL1P78423 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.17□□□□□ -0.14
CX3CL1P78423 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CX3CL1P78423 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.17□□□□□ -0.14
CX3CL1P78423 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
CX3CL1P78423 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.17□□□□□ -0.14
CX3CL1P78423 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CX3CL1P78423 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CX3CL1P78423 AC091076.1-201ENST00000610741 619 ntBASIC14.17□□□□□ -0.14
CX3CL1P78423 AL592071.1-201ENST00000611956 408 ntBASIC14.17□□□□□ -0.14
CX3CL1P78423 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CL1P78423 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.17□□□□□ -0.14
CX3CL1P78423 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CL1P78423 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CL1P78423 KRT8P47-201ENST00000604727 1398 ntBASIC14.17□□□□□ -0.14
CX3CL1P78423 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CL1P78423 AC108860.2-201ENST00000562760 2183 ntBASIC14.17□□□□□ -0.14
CX3CL1P78423 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.17□□□□□ -0.14
CX3CL1P78423 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CL1P78423 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CL1P78423 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CL1P78423 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.17□□□□□ -0.14
CX3CL1P78423 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.17□□□□□ -0.14
CX3CL1P78423 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CX3CL1P78423 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms