Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 GUSBP12-201ENST00000513727 720 ntBASIC18.3■□□□□ 0.52
IRX4P78413 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.3■□□□□ 0.52
IRX4P78413 AL592071.1-201ENST00000611956 408 ntBASIC18.3■□□□□ 0.52
IRX4P78413 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.3■□□□□ 0.52
IRX4P78413 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.3■□□□□ 0.52
IRX4P78413 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
IRX4P78413 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
IRX4P78413 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IRX4P78413 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IRX4P78413 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.3■□□□□ 0.52
IRX4P78413 HOXB1-202ENST00000577092 1414 ntBASIC18.3■□□□□ 0.52
IRX4P78413 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IRX4P78413 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
IRX4P78413 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.3■□□□□ 0.52
IRX4P78413 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
IRX4P78413 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
IRX4P78413 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
IRX4P78413 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
IRX4P78413 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IRX4P78413 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IRX4P78413 NSUN5P1-202ENST00000421140 1535 ntBASIC18.29■□□□□ 0.52
IRX4P78413 NSUN5P2-203ENST00000457352 1529 ntBASIC18.29■□□□□ 0.52
IRX4P78413 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.29■□□□□ 0.52
IRX4P78413 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
IRX4P78413 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IRX4P78413 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
IRX4P78413 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
IRX4P78413 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
IRX4P78413 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IRX4P78413 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.29■□□□□ 0.52
IRX4P78413 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IRX4P78413 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.29■□□□□ 0.52
IRX4P78413 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IRX4P78413 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
IRX4P78413 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.29■□□□□ 0.52
IRX4P78413 RN7SL606P-201ENST00000472779 293 ntBASIC18.29■□□□□ 0.52
IRX4P78413 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
IRX4P78413 SLC25A1P1-201ENST00000528351 927 ntBASIC18.29■□□□□ 0.52
IRX4P78413 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IRX4P78413 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.29■□□□□ 0.52
IRX4P78413 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
IRX4P78413 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.29■□□□□ 0.52
IRX4P78413 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IRX4P78413 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
IRX4P78413 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IRX4P78413 SIRPAP1-201ENST00000448467 1770 ntBASIC18.29■□□□□ 0.52
IRX4P78413 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.29■□□□□ 0.52
IRX4P78413 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IRX4P78413 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
IRX4P78413 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
IRX4P78413 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.29■□□□□ 0.52
IRX4P78413 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IRX4P78413 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
IRX4P78413 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
IRX4P78413 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
IRX4P78413 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
IRX4P78413 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
IRX4P78413 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.28■□□□□ 0.52
IRX4P78413 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
IRX4P78413 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IRX4P78413 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.28■□□□□ 0.52
IRX4P78413 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IRX4P78413 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IRX4P78413 IGHGP-201ENST00000390555 1178 ntBASIC18.28■□□□□ 0.52
IRX4P78413 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
IRX4P78413 FAM197Y8-203ENST00000450145 560 ntBASIC18.28■□□□□ 0.52
IRX4P78413 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.28■□□□□ 0.52
IRX4P78413 AL773604.1-201ENST00000617417 272 ntBASIC18.28■□□□□ 0.52
IRX4P78413 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
IRX4P78413 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.28■□□□□ 0.52
IRX4P78413 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
IRX4P78413 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
IRX4P78413 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.28■□□□□ 0.52
IRX4P78413 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IRX4P78413 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
IRX4P78413 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
IRX4P78413 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IRX4P78413 AL096828.2-201ENST00000567259 1965 ntBASIC18.28■□□□□ 0.52
IRX4P78413 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IRX4P78413 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
IRX4P78413 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
IRX4P78413 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
IRX4P78413 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
IRX4P78413 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
IRX4P78413 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.27■□□□□ 0.52
IRX4P78413 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.27■□□□□ 0.52
IRX4P78413 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
IRX4P78413 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.27■□□□□ 0.52
IRX4P78413 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
IRX4P78413 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
IRX4P78413 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
IRX4P78413 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
IRX4P78413 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.27■□□□□ 0.52
IRX4P78413 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.27■□□□□ 0.52
IRX4P78413 AP005901.3-202ENST00000581653 237 ntBASIC18.27■□□□□ 0.52
IRX4P78413 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.27■□□□□ 0.52
IRX4P78413 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
IRX4P78413 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.27■□□□□ 0.52
IRX4P78413 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
IRX4P78413 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms