Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.67■□□□□ 0.1
ACTA1P68133 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ACTA1P68133 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ACTA1P68133 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ACTA1P68133 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ACTA1P68133 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ACTA1P68133 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ACTA1P68133 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
ACTA1P68133 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ACTA1P68133 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
ACTA1P68133 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.66■□□□□ 0.1
ACTA1P68133 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ACTA1P68133 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ACTA1P68133 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
ACTA1P68133 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.66■□□□□ 0.1
ACTA1P68133 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
ACTA1P68133 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ACTA1P68133 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ACTA1P68133 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ACTA1P68133 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.66■□□□□ 0.1
ACTA1P68133 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ACTA1P68133 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ACTA1P68133 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.66■□□□□ 0.1
ACTA1P68133 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.66■□□□□ 0.1
ACTA1P68133 HMGA1P5-201ENST00000412453 271 ntBASIC15.66■□□□□ 0.1
ACTA1P68133 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ACTA1P68133 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.66■□□□□ 0.1
ACTA1P68133 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
ACTA1P68133 AL139327.4-201ENST00000612362 153 ntBASIC15.66■□□□□ 0.1
ACTA1P68133 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ACTA1P68133 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ACTA1P68133 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
ACTA1P68133 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ACTA1P68133 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
ACTA1P68133 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ACTA1P68133 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
ACTA1P68133 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ACTA1P68133 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ACTA1P68133 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.66■□□□□ 0.1
ACTA1P68133 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
ACTA1P68133 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.66■□□□□ 0.1
ACTA1P68133 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ACTA1P68133 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ACTA1P68133 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
ACTA1P68133 AGGF1P2-201ENST00000426656 2106 ntBASIC15.65■□□□□ 0.1
ACTA1P68133 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ACTA1P68133 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ACTA1P68133 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ACTA1P68133 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ACTA1P68133 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.65■□□□□ 0.1
ACTA1P68133 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ACTA1P68133 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
ACTA1P68133 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ACTA1P68133 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ACTA1P68133 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ACTA1P68133 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ACTA1P68133 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ACTA1P68133 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ACTA1P68133 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.65■□□□□ 0.1
ACTA1P68133 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.65■□□□□ 0.1
ACTA1P68133 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ACTA1P68133 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.65■□□□□ 0.1
ACTA1P68133 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.65■□□□□ 0.1
ACTA1P68133 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.65■□□□□ 0.1
ACTA1P68133 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.65■□□□□ 0.1
ACTA1P68133 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.65■□□□□ 0.1
ACTA1P68133 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ACTA1P68133 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ACTA1P68133 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ACTA1P68133 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.65■□□□□ 0.1
ACTA1P68133 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ACTA1P68133 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ACTA1P68133 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ACTA1P68133 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ACTA1P68133 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.65■□□□□ 0.1
ACTA1P68133 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ACTA1P68133 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ACTA1P68133 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ACTA1P68133 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ACTA1P68133 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ACTA1P68133 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ACTA1P68133 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.65■□□□□ 0.1
ACTA1P68133 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ACTA1P68133 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ACTA1P68133 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ACTA1P68133 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
ACTA1P68133 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
ACTA1P68133 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ACTA1P68133 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.64■□□□□ 0.09
ACTA1P68133 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ACTA1P68133 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
ACTA1P68133 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.64■□□□□ 0.09
ACTA1P68133 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
ACTA1P68133 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ACTA1P68133 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ACTA1P68133 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ACTA1P68133 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
ACTA1P68133 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ACTA1P68133 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ACTA1P68133 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms