Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3S2P59780 SLC29A4P1-201ENST00000398760 971 ntBASIC15.11■□□□□ 0.01
AP3S2P59780 NIFKP9-201ENST00000419265 221 ntBASIC15.11■□□□□ 0.01
AP3S2P59780 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.11■□□□□ 0.01
AP3S2P59780 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.11■□□□□ 0.01
AP3S2P59780 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3S2P59780 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC15.11■□□□□ 0.01
AP3S2P59780 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.11■□□□□ 0.01
AP3S2P59780 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.11■□□□□ 0.01
AP3S2P59780 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
AP3S2P59780 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AP3S2P59780 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
AP3S2P59780 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3S2P59780 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3S2P59780 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
AP3S2P59780 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.11■□□□□ 0.01
AP3S2P59780 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.11■□□□□ 0.01
AP3S2P59780 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
AP3S2P59780 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
AP3S2P59780 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.11■□□□□ 0.01
AP3S2P59780 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
AP3S2P59780 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.11■□□□□ 0.01
AP3S2P59780 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.11■□□□□ 0.01
AP3S2P59780 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.11■□□□□ 0.01
AP3S2P59780 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.11■□□□□ 0.01
AP3S2P59780 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
AP3S2P59780 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S2P59780 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
AP3S2P59780 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.1■□□□□ 0.01
AP3S2P59780 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S2P59780 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S2P59780 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.1■□□□□ 0.01
AP3S2P59780 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
AP3S2P59780 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S2P59780 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S2P59780 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S2P59780 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
AP3S2P59780 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
AP3S2P59780 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S2P59780 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S2P59780 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S2P59780 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S2P59780 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.1■□□□□ 0.01
AP3S2P59780 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S2P59780 MIR663A-201ENST00000385250 93 ntBASIC15.1■□□□□ 0.01
AP3S2P59780 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.1■□□□□ 0.01
AP3S2P59780 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S2P59780 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S2P59780 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.1■□□□□ 0.01
AP3S2P59780 AC026271.3-201ENST00000571884 352 ntBASIC15.1■□□□□ 0.01
AP3S2P59780 AC008687.5-201ENST00000593746 558 ntBASIC15.1■□□□□ 0.01
AP3S2P59780 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S2P59780 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S2P59780 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.1■□□□□ 0.01
AP3S2P59780 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.1■□□□□ 0.01
AP3S2P59780 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S2P59780 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.1■□□□□ 0.01
AP3S2P59780 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S2P59780 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
AP3S2P59780 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.1■□□□□ 0.01
AP3S2P59780 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S2P59780 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S2P59780 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S2P59780 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.1■□□□□ 0.01
AP3S2P59780 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S2P59780 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S2P59780 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S2P59780 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.1■□□□□ 0.01
AP3S2P59780 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
AP3S2P59780 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.1■□□□□ 0.01
AP3S2P59780 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S2P59780 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
AP3S2P59780 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.1■□□□□ 0.01
AP3S2P59780 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.1■□□□□ 0.01
AP3S2P59780 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.1■□□□□ 0.01
AP3S2P59780 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
AP3S2P59780 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.1■□□□□ 0.01
AP3S2P59780 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AP3S2P59780 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
AP3S2P59780 AC116353.5-201ENST00000638148 1699 ntBASIC15.09■□□□□ 0.01
AP3S2P59780 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3S2P59780 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.09■□□□□ 0.01
AP3S2P59780 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3S2P59780 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AP3S2P59780 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.09■□□□□ 0.01
AP3S2P59780 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3S2P59780 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.09■□□□□ 0.01
AP3S2P59780 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3S2P59780 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3S2P59780 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3S2P59780 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AP3S2P59780 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
AP3S2P59780 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
AP3S2P59780 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
AP3S2P59780 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
AP3S2P59780 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC15.09■□□□□ 0.01
AP3S2P59780 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC15.09■□□□□ 0.01
AP3S2P59780 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
AP3S2P59780 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.09■□□□□ 0.01
AP3S2P59780 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms