Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM11AP58511 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM11AP58511 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM11AP58511 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM11AP58511 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.2■□□□□ 0.18
SMIM11AP58511 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM11AP58511 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.2■□□□□ 0.18
SMIM11AP58511 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.2■□□□□ 0.18
SMIM11AP58511 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.2■□□□□ 0.18
SMIM11AP58511 AL139327.4-201ENST00000612362 153 ntBASIC16.2■□□□□ 0.18
SMIM11AP58511 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.2■□□□□ 0.18
SMIM11AP58511 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM11AP58511 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.2■□□□□ 0.18
SMIM11AP58511 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SMIM11AP58511 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM11AP58511 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM11AP58511 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.2■□□□□ 0.18
SMIM11AP58511 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.2■□□□□ 0.18
SMIM11AP58511 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM11AP58511 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM11AP58511 AC116353.5-201ENST00000638148 1699 ntBASIC16.2■□□□□ 0.18
SMIM11AP58511 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM11AP58511 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SMIM11AP58511 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM11AP58511 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM11AP58511 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.2■□□□□ 0.18
SMIM11AP58511 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SMIM11AP58511 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SMIM11AP58511 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.19■□□□□ 0.18
SMIM11AP58511 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM11AP58511 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM11AP58511 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SMIM11AP58511 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM11AP58511 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM11AP58511 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM11AP58511 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM11AP58511 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.19■□□□□ 0.18
SMIM11AP58511 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM11AP58511 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM11AP58511 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM11AP58511 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM11AP58511 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM11AP58511 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM11AP58511 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM11AP58511 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM11AP58511 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM11AP58511 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM11AP58511 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM11AP58511 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SMIM11AP58511 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM11AP58511 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.19■□□□□ 0.18
SMIM11AP58511 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.19■□□□□ 0.18
SMIM11AP58511 AC141257.4-201ENST00000634557 245 ntBASIC16.19■□□□□ 0.18
SMIM11AP58511 AC136944.6-201ENST00000634818 245 ntBASIC16.19■□□□□ 0.18
SMIM11AP58511 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM11AP58511 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM11AP58511 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM11AP58511 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM11AP58511 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM11AP58511 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.19■□□□□ 0.18
SMIM11AP58511 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM11AP58511 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM11AP58511 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.19■□□□□ 0.18
SMIM11AP58511 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SMIM11AP58511 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM11AP58511 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM11AP58511 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM11AP58511 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
SMIM11AP58511 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM11AP58511 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
SMIM11AP58511 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM11AP58511 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM11AP58511 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM11AP58511 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.18■□□□□ 0.18
SMIM11AP58511 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SMIM11AP58511 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM11AP58511 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.18■□□□□ 0.18
SMIM11AP58511 AL391807.1-203ENST00000604392 2365 ntBASIC16.18■□□□□ 0.18
SMIM11AP58511 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM11AP58511 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM11AP58511 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.18■□□□□ 0.18
SMIM11AP58511 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.18■□□□□ 0.18
SMIM11AP58511 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.18■□□□□ 0.18
SMIM11AP58511 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.18■□□□□ 0.18
SMIM11AP58511 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.18■□□□□ 0.18
SMIM11AP58511 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.18■□□□□ 0.18
SMIM11AP58511 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM11AP58511 GCSHP2-201ENST00000560971 527 ntBASIC16.18■□□□□ 0.18
SMIM11AP58511 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM11AP58511 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.18■□□□□ 0.18
SMIM11AP58511 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.18■□□□□ 0.18
SMIM11AP58511 AL136038.4-201ENST00000603606 1261 ntBASIC16.18■□□□□ 0.18
SMIM11AP58511 AC140113.3-201ENST00000605663 199 ntBASIC16.18■□□□□ 0.18
SMIM11AP58511 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM11AP58511 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM11AP58511 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM11AP58511 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM11AP58511 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM11AP58511 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SMIM11AP58511 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms