Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH13P55290 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH13P55290 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.19■□□□□ 0.34
CDH13P55290 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CDH13P55290 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH13P55290 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH13P55290 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CDH13P55290 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH13P55290 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.19■□□□□ 0.34
CDH13P55290 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.19■□□□□ 0.34
CDH13P55290 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH13P55290 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CDH13P55290 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.19■□□□□ 0.34
CDH13P55290 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.19■□□□□ 0.34
CDH13P55290 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.19■□□□□ 0.34
CDH13P55290 AC005104.2-201ENST00000427818 678 ntBASIC17.19■□□□□ 0.34
CDH13P55290 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.19■□□□□ 0.34
CDH13P55290 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.19■□□□□ 0.34
CDH13P55290 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.19■□□□□ 0.34
CDH13P55290 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH13P55290 RNF126P1-202ENST00000569893 925 ntBASIC17.19■□□□□ 0.34
CDH13P55290 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH13P55290 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH13P55290 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH13P55290 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH13P55290 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CDH13P55290 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH13P55290 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH13P55290 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH13P55290 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.19■□□□□ 0.34
CDH13P55290 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.19■□□□□ 0.34
CDH13P55290 OR6D1P-203ENST00000641209 4860 ntBASIC17.19■□□□□ 0.34
CDH13P55290 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CDH13P55290 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.18■□□□□ 0.34
CDH13P55290 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH13P55290 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH13P55290 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH13P55290 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH13P55290 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.18■□□□□ 0.34
CDH13P55290 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH13P55290 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CDH13P55290 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH13P55290 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CDH13P55290 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH13P55290 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH13P55290 AK4P3-201ENST00000418260 669 ntBASIC17.18■□□□□ 0.34
CDH13P55290 HOMER2P1-201ENST00000455653 964 ntBASIC17.18■□□□□ 0.34
CDH13P55290 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH13P55290 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.18■□□□□ 0.34
CDH13P55290 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.18■□□□□ 0.34
CDH13P55290 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.18■□□□□ 0.34
CDH13P55290 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH13P55290 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH13P55290 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.18■□□□□ 0.34
CDH13P55290 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.18■□□□□ 0.34
CDH13P55290 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH13P55290 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH13P55290 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH13P55290 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CDH13P55290 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH13P55290 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH13P55290 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH13P55290 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH13P55290 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CDH13P55290 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH13P55290 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH13P55290 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CDH13P55290 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH13P55290 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.18■□□□□ 0.34
CDH13P55290 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH13P55290 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH13P55290 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH13P55290 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CDH13P55290 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH13P55290 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH13P55290 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH13P55290 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
CDH13P55290 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CDH13P55290 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CDH13P55290 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH13P55290 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CDH13P55290 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH13P55290 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.17■□□□□ 0.34
CDH13P55290 AC211429.1-201ENST00000415277 523 ntBASIC17.17■□□□□ 0.34
CDH13P55290 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.17■□□□□ 0.34
CDH13P55290 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.17■□□□□ 0.34
CDH13P55290 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH13P55290 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.17■□□□□ 0.34
CDH13P55290 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.17■□□□□ 0.34
CDH13P55290 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH13P55290 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.17■□□□□ 0.34
CDH13P55290 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.17■□□□□ 0.34
CDH13P55290 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH13P55290 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH13P55290 AL390719.2-201ENST00000606993 987 ntBASIC17.17■□□□□ 0.34
CDH13P55290 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.17■□□□□ 0.34
CDH13P55290 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH13P55290 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.17■□□□□ 0.34
CDH13P55290 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH13P55290 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms