Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LIMK2P53671 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
LIMK2P53671 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LIMK2P53671 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.71■□□□□ 0.43
LIMK2P53671 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LIMK2P53671 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LIMK2P53671 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.71■□□□□ 0.43
LIMK2P53671 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.71■□□□□ 0.43
LIMK2P53671 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LIMK2P53671 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LIMK2P53671 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LIMK2P53671 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.71■□□□□ 0.43
LIMK2P53671 AC004870.1-201ENST00000315132 882 ntBASIC17.71■□□□□ 0.43
LIMK2P53671 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LIMK2P53671 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LIMK2P53671 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
LIMK2P53671 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LIMK2P53671 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.71■□□□□ 0.43
LIMK2P53671 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LIMK2P53671 TOB2P1-201ENST00000469761 992 ntBASIC17.71■□□□□ 0.43
LIMK2P53671 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.71■□□□□ 0.43
LIMK2P53671 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LIMK2P53671 AC012615.1-201ENST00000565797 1299 ntBASIC17.71■□□□□ 0.43
LIMK2P53671 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.71■□□□□ 0.43
LIMK2P53671 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.71■□□□□ 0.43
LIMK2P53671 IGHV3-41-201ENST00000613121 348 ntBASIC17.71■□□□□ 0.43
LIMK2P53671 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LIMK2P53671 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.71■□□□□ 0.43
LIMK2P53671 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LIMK2P53671 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LIMK2P53671 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LIMK2P53671 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LIMK2P53671 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LIMK2P53671 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LIMK2P53671 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LIMK2P53671 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LIMK2P53671 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LIMK2P53671 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.42
LIMK2P53671 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
LIMK2P53671 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LIMK2P53671 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
LIMK2P53671 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LIMK2P53671 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LIMK2P53671 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LIMK2P53671 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.7■□□□□ 0.42
LIMK2P53671 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LIMK2P53671 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.7■□□□□ 0.42
LIMK2P53671 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
LIMK2P53671 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LIMK2P53671 AL121761.2-201ENST00000598007 1648 ntBASIC17.7■□□□□ 0.42
LIMK2P53671 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LIMK2P53671 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LIMK2P53671 IGHGP-201ENST00000390555 1178 ntBASIC17.7■□□□□ 0.42
LIMK2P53671 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LIMK2P53671 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.7■□□□□ 0.42
LIMK2P53671 UNC93B7-201ENST00000509439 705 ntBASIC17.7■□□□□ 0.42
LIMK2P53671 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.7■□□□□ 0.42
LIMK2P53671 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.7■□□□□ 0.42
LIMK2P53671 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LIMK2P53671 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LIMK2P53671 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LIMK2P53671 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.7■□□□□ 0.42
LIMK2P53671 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LIMK2P53671 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.7■□□□□ 0.42
LIMK2P53671 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LIMK2P53671 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LIMK2P53671 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LIMK2P53671 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.7■□□□□ 0.42
LIMK2P53671 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LIMK2P53671 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
LIMK2P53671 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LIMK2P53671 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
LIMK2P53671 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LIMK2P53671 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
LIMK2P53671 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
LIMK2P53671 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LIMK2P53671 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LIMK2P53671 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LIMK2P53671 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LIMK2P53671 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.69■□□□□ 0.42
LIMK2P53671 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LIMK2P53671 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LIMK2P53671 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LIMK2P53671 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LIMK2P53671 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
LIMK2P53671 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
LIMK2P53671 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LIMK2P53671 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LIMK2P53671 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LIMK2P53671 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LIMK2P53671 TSPY19P-201ENST00000418461 509 ntBASIC17.69■□□□□ 0.42
LIMK2P53671 TSPY12P-201ENST00000421279 868 ntBASIC17.69■□□□□ 0.42
LIMK2P53671 AL845331.1-201ENST00000424978 1190 ntBASIC17.69■□□□□ 0.42
LIMK2P53671 TSPY18P-201ENST00000441642 509 ntBASIC17.69■□□□□ 0.42
LIMK2P53671 FAAHP1-202ENST00000446499 1238 ntBASIC17.69■□□□□ 0.42
LIMK2P53671 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.69■□□□□ 0.42
LIMK2P53671 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LIMK2P53671 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
LIMK2P53671 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.69■□□□□ 0.42
LIMK2P53671 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms