Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN2P51788 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.05■□□□□ 0.32
CLCN2P51788 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.05■□□□□ 0.32
CLCN2P51788 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN2P51788 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CLCN2P51788 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN2P51788 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CLCN2P51788 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN2P51788 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN2P51788 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCN2P51788 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.05■□□□□ 0.32
CLCN2P51788 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.04■□□□□ 0.32
CLCN2P51788 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCN2P51788 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCN2P51788 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLCN2P51788 AC099343.3-201ENST00000605834 2503 ntBASIC17.04■□□□□ 0.32
CLCN2P51788 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCN2P51788 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCN2P51788 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLCN2P51788 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.04■□□□□ 0.32
CLCN2P51788 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
CLCN2P51788 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.04■□□□□ 0.32
CLCN2P51788 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLCN2P51788 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCN2P51788 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.04■□□□□ 0.32
CLCN2P51788 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.04■□□□□ 0.32
CLCN2P51788 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.04■□□□□ 0.32
CLCN2P51788 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.04■□□□□ 0.32
CLCN2P51788 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.04■□□□□ 0.32
CLCN2P51788 AC024563.2-201ENST00000603282 481 ntBASIC17.04■□□□□ 0.32
CLCN2P51788 AC069148.1-201ENST00000608741 768 ntBASIC17.04■□□□□ 0.32
CLCN2P51788 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CLCN2P51788 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.04■□□□□ 0.32
CLCN2P51788 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCN2P51788 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CLCN2P51788 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCN2P51788 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCN2P51788 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCN2P51788 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCN2P51788 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.04■□□□□ 0.32
CLCN2P51788 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCN2P51788 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCN2P51788 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCN2P51788 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.03■□□□□ 0.32
CLCN2P51788 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN2P51788 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN2P51788 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN2P51788 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN2P51788 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CLCN2P51788 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN2P51788 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
CLCN2P51788 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.03■□□□□ 0.32
CLCN2P51788 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.03■□□□□ 0.32
CLCN2P51788 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN2P51788 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.03■□□□□ 0.32
CLCN2P51788 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN2P51788 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CLCN2P51788 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN2P51788 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CLCN2P51788 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.03■□□□□ 0.32
CLCN2P51788 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN2P51788 AC011498.5-201ENST00000592027 486 ntBASIC17.03■□□□□ 0.32
CLCN2P51788 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CLCN2P51788 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN2P51788 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN2P51788 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.03■□□□□ 0.32
CLCN2P51788 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN2P51788 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN2P51788 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN2P51788 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN2P51788 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN2P51788 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CLCN2P51788 CICP6-201ENST00000457191 2729 ntBASIC17.03■□□□□ 0.32
CLCN2P51788 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.03■□□□□ 0.32
CLCN2P51788 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.03■□□□□ 0.32
CLCN2P51788 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLCN2P51788 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.02■□□□□ 0.32
CLCN2P51788 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN2P51788 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN2P51788 KRT18P55-202ENST00000578578 1546 ntBASIC17.02■□□□□ 0.32
CLCN2P51788 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN2P51788 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN2P51788 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN2P51788 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN2P51788 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN2P51788 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN2P51788 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN2P51788 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.02■□□□□ 0.32
CLCN2P51788 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CLCN2P51788 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN2P51788 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN2P51788 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.02■□□□□ 0.32
CLCN2P51788 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.02■□□□□ 0.32
CLCN2P51788 AP003733.1-201ENST00000491725 852 ntBASIC17.02■□□□□ 0.32
CLCN2P51788 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLCN2P51788 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.02■□□□□ 0.32
CLCN2P51788 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CLCN2P51788 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.02■□□□□ 0.32
CLCN2P51788 AC008687.5-201ENST00000593746 558 ntBASIC17.02■□□□□ 0.32
CLCN2P51788 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms