Protein–RNA interactions for Protein: P50553

ASCL1, Achaete-scute homolog 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASCL1P50553 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
ASCL1P50553 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
ASCL1P50553 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ASCL1P50553 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
ASCL1P50553 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ASCL1P50553 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ASCL1P50553 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
ASCL1P50553 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ASCL1P50553 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.62■□□□□ 0.09
ASCL1P50553 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.62■□□□□ 0.09
ASCL1P50553 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ASCL1P50553 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.62■□□□□ 0.09
ASCL1P50553 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ASCL1P50553 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
ASCL1P50553 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
ASCL1P50553 Z83851.2-201ENST00000609564 659 ntBASIC15.62■□□□□ 0.09
ASCL1P50553 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ASCL1P50553 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
ASCL1P50553 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
ASCL1P50553 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ASCL1P50553 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.62■□□□□ 0.09
ASCL1P50553 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.62■□□□□ 0.09
ASCL1P50553 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ASCL1P50553 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.62■□□□□ 0.09
ASCL1P50553 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
ASCL1P50553 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ASCL1P50553 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ASCL1P50553 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
ASCL1P50553 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.62■□□□□ 0.09
ASCL1P50553 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.62■□□□□ 0.09
ASCL1P50553 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
ASCL1P50553 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
ASCL1P50553 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
ASCL1P50553 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ASCL1P50553 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ASCL1P50553 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ASCL1P50553 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ASCL1P50553 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
ASCL1P50553 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ASCL1P50553 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ASCL1P50553 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
ASCL1P50553 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ASCL1P50553 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.61■□□□□ 0.09
ASCL1P50553 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
ASCL1P50553 RNA5SP415-201ENST00000517246 115 ntBASIC15.61■□□□□ 0.09
ASCL1P50553 AC012640.2-201ENST00000561606 901 ntBASIC15.61■□□□□ 0.09
ASCL1P50553 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ASCL1P50553 AC140113.2-201ENST00000604370 208 ntBASIC15.61■□□□□ 0.09
ASCL1P50553 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.61■□□□□ 0.09
ASCL1P50553 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ASCL1P50553 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ASCL1P50553 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ASCL1P50553 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.61■□□□□ 0.09
ASCL1P50553 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.61■□□□□ 0.09
ASCL1P50553 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
ASCL1P50553 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.61■□□□□ 0.09
ASCL1P50553 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.61■□□□□ 0.09
ASCL1P50553 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
ASCL1P50553 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
ASCL1P50553 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ASCL1P50553 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
ASCL1P50553 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ASCL1P50553 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
ASCL1P50553 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ASCL1P50553 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.61■□□□□ 0.09
ASCL1P50553 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.61■□□□□ 0.09
ASCL1P50553 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ASCL1P50553 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.61■□□□□ 0.09
ASCL1P50553 AC079776.2-201ENST00000641154 1609 ntBASIC15.61■□□□□ 0.09
ASCL1P50553 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.6■□□□□ 0.09
ASCL1P50553 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.6■□□□□ 0.09
ASCL1P50553 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ASCL1P50553 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ASCL1P50553 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ASCL1P50553 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ASCL1P50553 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ASCL1P50553 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.6■□□□□ 0.09
ASCL1P50553 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
ASCL1P50553 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
ASCL1P50553 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
ASCL1P50553 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
ASCL1P50553 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ASCL1P50553 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ASCL1P50553 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ASCL1P50553 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
ASCL1P50553 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.6■□□□□ 0.09
ASCL1P50553 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.6■□□□□ 0.09
ASCL1P50553 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ASCL1P50553 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.6■□□□□ 0.09
ASCL1P50553 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
ASCL1P50553 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.6■□□□□ 0.09
ASCL1P50553 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.6■□□□□ 0.09
ASCL1P50553 AC034105.1-201ENST00000563488 319 ntBASIC15.6■□□□□ 0.09
ASCL1P50553 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.6■□□□□ 0.09
ASCL1P50553 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.6■□□□□ 0.09
ASCL1P50553 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ASCL1P50553 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
ASCL1P50553 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
ASCL1P50553 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.6■□□□□ 0.09
ASCL1P50553 AL022326.1-202ENST00000641533 845 ntBASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms