Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
UBE2AP49459 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
UBE2AP49459 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
UBE2AP49459 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UBE2AP49459 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC11.18□□□□□ -0.62
UBE2AP49459 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
UBE2AP49459 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2AP49459 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2AP49459 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2AP49459 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2AP49459 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2AP49459 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2AP49459 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2AP49459 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2AP49459 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC11.17□□□□□ -0.62
UBE2AP49459 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2AP49459 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC11.17□□□□□ -0.62
UBE2AP49459 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
UBE2AP49459 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2AP49459 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
UBE2AP49459 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2AP49459 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC11.17□□□□□ -0.62
UBE2AP49459 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2AP49459 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2AP49459 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC11.17□□□□□ -0.62
UBE2AP49459 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
UBE2AP49459 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2AP49459 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2AP49459 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
UBE2AP49459 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2AP49459 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC11.17□□□□□ -0.62
UBE2AP49459 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
UBE2AP49459 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC11.17□□□□□ -0.62
UBE2AP49459 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2AP49459 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC11.17□□□□□ -0.62
UBE2AP49459 FAM8A6P-201ENST00000407496 1135 ntBASIC11.17□□□□□ -0.62
UBE2AP49459 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC11.17□□□□□ -0.62
UBE2AP49459 PVRIG2P-201ENST00000435460 978 ntBASIC11.17□□□□□ -0.62
UBE2AP49459 GXYLT1P3-201ENST00000453058 1193 ntBASIC11.17□□□□□ -0.62
UBE2AP49459 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC11.17□□□□□ -0.62
UBE2AP49459 COX11P1-201ENST00000489116 835 ntBASIC11.17□□□□□ -0.62
UBE2AP49459 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC11.17□□□□□ -0.62
UBE2AP49459 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC11.17□□□□□ -0.62
UBE2AP49459 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC11.17□□□□□ -0.62
UBE2AP49459 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC11.17□□□□□ -0.62
UBE2AP49459 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC11.17□□□□□ -0.62
UBE2AP49459 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2AP49459 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2AP49459 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
UBE2AP49459 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2AP49459 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2AP49459 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2AP49459 AC097376.2-205ENST00000610159 5334 ntBASIC11.17□□□□□ -0.62
UBE2AP49459 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
UBE2AP49459 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
UBE2AP49459 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
UBE2AP49459 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC11.16□□□□□ -0.62
UBE2AP49459 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
UBE2AP49459 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2AP49459 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2AP49459 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2AP49459 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2AP49459 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2AP49459 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2AP49459 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2AP49459 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC11.16□□□□□ -0.62
UBE2AP49459 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2AP49459 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC11.16□□□□□ -0.62
UBE2AP49459 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2AP49459 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2AP49459 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
UBE2AP49459 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2AP49459 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2AP49459 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2AP49459 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
UBE2AP49459 SP100-208ENST00000427101 1922 ntTSL 2 BASIC11.16□□□□□ -0.62
UBE2AP49459 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC11.16□□□□□ -0.62
UBE2AP49459 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2AP49459 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2AP49459 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2AP49459 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC11.16□□□□□ -0.62
UBE2AP49459 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC11.16□□□□□ -0.62
UBE2AP49459 DUT-205ENST00000558813 769 ntTSL 2 BASIC11.16□□□□□ -0.62
UBE2AP49459 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
UBE2AP49459 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2AP49459 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
UBE2AP49459 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
UBE2AP49459 AC073912.3-201ENST00000624414 853 ntBASIC11.16□□□□□ -0.62
UBE2AP49459 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2AP49459 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
UBE2AP49459 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2AP49459 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
UBE2AP49459 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms