Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.65■□□□□ 0.9
NEDD4P46934 AC046185.3-201ENST00000623228 1824 ntBASIC20.65■□□□□ 0.9
NEDD4P46934 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEDD4P46934 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NEDD4P46934 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NEDD4P46934 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NEDD4P46934 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NEDD4P46934 AL020989.1-201ENST00000422979 469 ntBASIC20.64■□□□□ 0.89
NEDD4P46934 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.64■□□□□ 0.89
NEDD4P46934 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.64■□□□□ 0.89
NEDD4P46934 AC021087.4-201ENST00000563761 564 ntBASIC20.64■□□□□ 0.89
NEDD4P46934 AC025062.2-201ENST00000605477 670 ntBASIC20.64■□□□□ 0.89
NEDD4P46934 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.64■□□□□ 0.89
NEDD4P46934 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NEDD4P46934 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.64■□□□□ 0.89
NEDD4P46934 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.64■□□□□ 0.89
NEDD4P46934 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
NEDD4P46934 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NEDD4P46934 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NEDD4P46934 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
NEDD4P46934 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NEDD4P46934 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NEDD4P46934 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NEDD4P46934 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
NEDD4P46934 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NEDD4P46934 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.64■□□□□ 0.89
NEDD4P46934 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NEDD4P46934 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NEDD4P46934 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NEDD4P46934 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
NEDD4P46934 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NEDD4P46934 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.63■□□□□ 0.89
NEDD4P46934 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.63■□□□□ 0.89
NEDD4P46934 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEDD4P46934 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEDD4P46934 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.63■□□□□ 0.89
NEDD4P46934 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEDD4P46934 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEDD4P46934 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEDD4P46934 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NEDD4P46934 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.63■□□□□ 0.89
NEDD4P46934 MRPL3P1-201ENST00000400109 1033 ntBASIC20.63■□□□□ 0.89
NEDD4P46934 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.63■□□□□ 0.89
NEDD4P46934 AL160237.2-201ENST00000556165 472 ntBASIC20.63■□□□□ 0.89
NEDD4P46934 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.63■□□□□ 0.89
NEDD4P46934 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.63■□□□□ 0.89
NEDD4P46934 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.63■□□□□ 0.89
NEDD4P46934 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEDD4P46934 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NEDD4P46934 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEDD4P46934 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEDD4P46934 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NEDD4P46934 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.63■□□□□ 0.89
NEDD4P46934 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NEDD4P46934 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.63■□□□□ 0.89
NEDD4P46934 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.63■□□□□ 0.89
NEDD4P46934 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.62■□□□□ 0.89
NEDD4P46934 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NEDD4P46934 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NEDD4P46934 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NEDD4P46934 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
NEDD4P46934 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.62■□□□□ 0.89
NEDD4P46934 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.62■□□□□ 0.89
NEDD4P46934 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.62■□□□□ 0.89
NEDD4P46934 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
NEDD4P46934 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NEDD4P46934 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.62■□□□□ 0.89
NEDD4P46934 AC018712.1-201ENST00000455767 687 ntBASIC20.62■□□□□ 0.89
NEDD4P46934 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
NEDD4P46934 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.62■□□□□ 0.89
NEDD4P46934 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.62■□□□□ 0.89
NEDD4P46934 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.62■□□□□ 0.89
NEDD4P46934 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.62■□□□□ 0.89
NEDD4P46934 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
NEDD4P46934 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.62■□□□□ 0.89
NEDD4P46934 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.62■□□□□ 0.89
NEDD4P46934 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NEDD4P46934 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.62■□□□□ 0.89
NEDD4P46934 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NEDD4P46934 AL138688.1-201ENST00000624851 1594 ntBASIC20.62■□□□□ 0.89
NEDD4P46934 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NEDD4P46934 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.62■□□□□ 0.89
NEDD4P46934 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
NEDD4P46934 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NEDD4P46934 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NEDD4P46934 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.62■□□□□ 0.89
NEDD4P46934 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NEDD4P46934 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.62■□□□□ 0.89
NEDD4P46934 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NEDD4P46934 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NEDD4P46934 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NEDD4P46934 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NEDD4P46934 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NEDD4P46934 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NEDD4P46934 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
NEDD4P46934 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
NEDD4P46934 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.61■□□□□ 0.89
NEDD4P46934 FAM197Y8-203ENST00000450145 560 ntBASIC20.61■□□□□ 0.89
NEDD4P46934 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.61■□□□□ 0.89
NEDD4P46934 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms