Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
ATP6V1AP38606 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
ATP6V1AP38606 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ATP6V1AP38606 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
ATP6V1AP38606 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ATP6V1AP38606 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
ATP6V1AP38606 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC22.22■■□□□ 1.15
ATP6V1AP38606 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ATP6V1AP38606 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
ATP6V1AP38606 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC22.21■■□□□ 1.15
ATP6V1AP38606 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC22.21■■□□□ 1.15
ATP6V1AP38606 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
ATP6V1AP38606 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
ATP6V1AP38606 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
ATP6V1AP38606 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
ATP6V1AP38606 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ATP6V1AP38606 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ATP6V1AP38606 HNRNPFP1-201ENST00000391730 1133 ntBASIC22.21■■□□□ 1.15
ATP6V1AP38606 NABP1-203ENST00000409510 843 ntTSL 5 BASIC22.21■■□□□ 1.15
ATP6V1AP38606 AL627223.1-201ENST00000416693 442 ntBASIC22.21■■□□□ 1.15
ATP6V1AP38606 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC22.21■■□□□ 1.15
ATP6V1AP38606 WBP2-203ENST00000433525 928 ntTSL 2 BASIC22.21■■□□□ 1.15
ATP6V1AP38606 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC22.21■■□□□ 1.15
ATP6V1AP38606 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
ATP6V1AP38606 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC22.21■■□□□ 1.15
ATP6V1AP38606 FLYWCH1P1-201ENST00000460917 1874 ntBASIC22.21■■□□□ 1.15
ATP6V1AP38606 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
ATP6V1AP38606 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
ATP6V1AP38606 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ATP6V1AP38606 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
ATP6V1AP38606 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC22.21■■□□□ 1.15
ATP6V1AP38606 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC22.21■■□□□ 1.15
ATP6V1AP38606 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
ATP6V1AP38606 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC22.2■■□□□ 1.15
ATP6V1AP38606 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
ATP6V1AP38606 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
ATP6V1AP38606 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
ATP6V1AP38606 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC22.2■■□□□ 1.14
ATP6V1AP38606 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
ATP6V1AP38606 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ATP6V1AP38606 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ATP6V1AP38606 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC22.2■■□□□ 1.14
ATP6V1AP38606 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ATP6V1AP38606 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
ATP6V1AP38606 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
ATP6V1AP38606 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC22.2■■□□□ 1.14
ATP6V1AP38606 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC22.2■■□□□ 1.14
ATP6V1AP38606 DUX4L27-201ENST00000554796 1261 ntBASIC22.2■■□□□ 1.14
ATP6V1AP38606 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ATP6V1AP38606 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC22.2■■□□□ 1.14
ATP6V1AP38606 AC026120.1-201ENST00000611536 926 ntBASIC22.2■■□□□ 1.14
ATP6V1AP38606 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
ATP6V1AP38606 AC009093.7-201ENST00000623853 1223 ntBASIC22.2■■□□□ 1.14
ATP6V1AP38606 AP000997.3-201ENST00000623333 2250 ntBASIC22.2■■□□□ 1.14
ATP6V1AP38606 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ATP6V1AP38606 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
ATP6V1AP38606 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
ATP6V1AP38606 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ATP6V1AP38606 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.14
ATP6V1AP38606 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
ATP6V1AP38606 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
ATP6V1AP38606 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
ATP6V1AP38606 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
ATP6V1AP38606 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC22.2■■□□□ 1.14
ATP6V1AP38606 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ATP6V1AP38606 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ATP6V1AP38606 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ATP6V1AP38606 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ATP6V1AP38606 AC002056.1-201ENST00000395613 760 ntBASIC22.19■■□□□ 1.14
ATP6V1AP38606 PNKD-204ENST00000436005 978 ntTSL 5 BASIC22.19■■□□□ 1.14
ATP6V1AP38606 AC244107.1-201ENST00000442033 332 ntBASIC22.19■■□□□ 1.14
ATP6V1AP38606 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC22.19■■□□□ 1.14
ATP6V1AP38606 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC22.19■■□□□ 1.14
ATP6V1AP38606 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ATP6V1AP38606 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC22.19■■□□□ 1.14
ATP6V1AP38606 SLC25A6P2-201ENST00000497974 877 ntBASIC22.19■■□□□ 1.14
ATP6V1AP38606 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC22.19■■□□□ 1.14
ATP6V1AP38606 AC069262.1-201ENST00000539058 672 ntBASIC22.19■■□□□ 1.14
ATP6V1AP38606 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC22.19■■□□□ 1.14
ATP6V1AP38606 RPL28-209ENST00000560055 670 ntTSL 3 BASIC22.19■■□□□ 1.14
ATP6V1AP38606 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC22.19■■□□□ 1.14
ATP6V1AP38606 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ATP6V1AP38606 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC22.19■■□□□ 1.14
ATP6V1AP38606 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ATP6V1AP38606 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC22.19■■□□□ 1.14
ATP6V1AP38606 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
ATP6V1AP38606 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC22.19■■□□□ 1.14
ATP6V1AP38606 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ATP6V1AP38606 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
ATP6V1AP38606 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC22.18■■□□□ 1.14
ATP6V1AP38606 REXO1L9P-201ENST00000604264 2108 ntBASIC22.18■■□□□ 1.14
ATP6V1AP38606 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
ATP6V1AP38606 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC22.18■■□□□ 1.14
ATP6V1AP38606 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
ATP6V1AP38606 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ATP6V1AP38606 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ATP6V1AP38606 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC22.18■■□□□ 1.14
ATP6V1AP38606 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
ATP6V1AP38606 AL671277.1-201ENST00000429656 993 ntBASIC22.18■■□□□ 1.14
ATP6V1AP38606 KRT8P48-201ENST00000515599 1220 ntBASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms