Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC21.48■■□□□ 1.03
PDE6BP35913 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDE6BP35913 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC21.48■■□□□ 1.03
PDE6BP35913 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PDE6BP35913 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDE6BP35913 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC21.48■■□□□ 1.03
PDE6BP35913 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDE6BP35913 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDE6BP35913 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.48■■□□□ 1.03
PDE6BP35913 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PDE6BP35913 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC21.47■■□□□ 1.03
PDE6BP35913 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDE6BP35913 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.47■■□□□ 1.03
PDE6BP35913 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDE6BP35913 AC093677.2-201ENST00000600169 1863 ntBASIC21.47■■□□□ 1.03
PDE6BP35913 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDE6BP35913 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDE6BP35913 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.47■■□□□ 1.03
PDE6BP35913 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
PDE6BP35913 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.47■■□□□ 1.03
PDE6BP35913 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC21.47■■□□□ 1.03
PDE6BP35913 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDE6BP35913 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC21.47■■□□□ 1.03
PDE6BP35913 COPE-202ENST00000349893 948 ntTSL 2 BASIC21.47■■□□□ 1.03
PDE6BP35913 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC21.47■■□□□ 1.03
PDE6BP35913 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDE6BP35913 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
PDE6BP35913 AC015922.1-201ENST00000421102 1152 ntBASIC21.47■■□□□ 1.03
PDE6BP35913 BASP1P1-201ENST00000430708 665 ntBASIC21.47■■□□□ 1.03
PDE6BP35913 AC055876.3-201ENST00000431496 288 ntBASIC21.47■■□□□ 1.03
PDE6BP35913 AL592309.1-201ENST00000443127 649 ntBASIC21.47■■□□□ 1.03
PDE6BP35913 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDE6BP35913 AL512356.2-201ENST00000546955 174 ntBASIC21.47■■□□□ 1.03
PDE6BP35913 AC051619.7-201ENST00000568314 623 ntBASIC21.47■■□□□ 1.03
PDE6BP35913 AC138649.4-201ENST00000612222 287 ntBASIC21.47■■□□□ 1.03
PDE6BP35913 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDE6BP35913 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDE6BP35913 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDE6BP35913 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDE6BP35913 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDE6BP35913 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDE6BP35913 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PDE6BP35913 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDE6BP35913 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC21.46■■□□□ 1.03
PDE6BP35913 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PDE6BP35913 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
PDE6BP35913 CYP51A1P2-201ENST00000419457 1499 ntBASIC21.46■■□□□ 1.03
PDE6BP35913 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDE6BP35913 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDE6BP35913 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDE6BP35913 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDE6BP35913 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDE6BP35913 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDE6BP35913 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDE6BP35913 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDE6BP35913 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.46■■□□□ 1.03
PDE6BP35913 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDE6BP35913 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PDE6BP35913 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC21.46■■□□□ 1.03
PDE6BP35913 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PDE6BP35913 RN7SL589P-201ENST00000481268 310 ntBASIC21.46■■□□□ 1.03
PDE6BP35913 SLC25A6P2-201ENST00000497974 877 ntBASIC21.46■■□□□ 1.03
PDE6BP35913 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC21.46■■□□□ 1.03
PDE6BP35913 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC21.46■■□□□ 1.03
PDE6BP35913 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC21.46■■□□□ 1.03
PDE6BP35913 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC21.46■■□□□ 1.03
PDE6BP35913 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC21.46■■□□□ 1.03
PDE6BP35913 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDE6BP35913 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PDE6BP35913 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC21.46■■□□□ 1.03
PDE6BP35913 AL645728.2-201ENST00000641974 660 ntBASIC21.46■■□□□ 1.03
PDE6BP35913 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PDE6BP35913 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDE6BP35913 BSG-215ENST00000618006 1329 ntTSL 2 BASIC21.46■■□□□ 1.03
PDE6BP35913 AC063926.2-201ENST00000623766 1308 ntBASIC21.46■■□□□ 1.03
PDE6BP35913 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDE6BP35913 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC21.46■■□□□ 1.03
PDE6BP35913 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC21.46■■□□□ 1.03
PDE6BP35913 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDE6BP35913 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.46■■□□□ 1.03
PDE6BP35913 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
PDE6BP35913 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PDE6BP35913 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PDE6BP35913 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
PDE6BP35913 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
PDE6BP35913 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC21.45■■□□□ 1.02
PDE6BP35913 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PDE6BP35913 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDE6BP35913 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC21.45■■□□□ 1.02
PDE6BP35913 AC005034.1-201ENST00000426657 489 ntBASIC21.45■■□□□ 1.02
PDE6BP35913 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC21.45■■□□□ 1.02
PDE6BP35913 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC21.45■■□□□ 1.02
PDE6BP35913 AC079140.1-201ENST00000508039 487 ntBASIC21.45■■□□□ 1.02
PDE6BP35913 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC21.45■■□□□ 1.02
PDE6BP35913 RBM7-207ENST00000544582 692 ntTSL 3 BASIC21.45■■□□□ 1.02
PDE6BP35913 TSFM-210ENST00000550559 897 ntTSL 5 BASIC21.45■■□□□ 1.02
PDE6BP35913 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDE6BP35913 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC21.45■■□□□ 1.02
PDE6BP35913 AL035252.4-201ENST00000624174 288 ntBASIC21.45■■□□□ 1.02
PDE6BP35913 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms