Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCK1P35558 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCK1P35558 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
PCK1P35558 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCK1P35558 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCK1P35558 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCK1P35558 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PCK1P35558 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCK1P35558 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.51■□□□□ 0.55
PCK1P35558 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCK1P35558 AC005332.1-201ENST00000577698 1310 ntBASIC18.5■□□□□ 0.55
PCK1P35558 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCK1P35558 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PCK1P35558 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCK1P35558 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.5■□□□□ 0.55
PCK1P35558 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCK1P35558 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCK1P35558 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.5■□□□□ 0.55
PCK1P35558 AC084018.2-201ENST00000613093 2607 ntBASIC18.5■□□□□ 0.55
PCK1P35558 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PCK1P35558 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCK1P35558 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCK1P35558 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCK1P35558 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCK1P35558 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCK1P35558 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.5■□□□□ 0.55
PCK1P35558 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.5■□□□□ 0.55
PCK1P35558 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCK1P35558 FAM86EP-206ENST00000510506 987 ntBASIC18.5■□□□□ 0.55
PCK1P35558 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.5■□□□□ 0.55
PCK1P35558 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCK1P35558 AL592071.1-201ENST00000611956 408 ntBASIC18.5■□□□□ 0.55
PCK1P35558 AL590326.2-201ENST00000625139 305 ntBASIC18.5■□□□□ 0.55
PCK1P35558 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PCK1P35558 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCK1P35558 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCK1P35558 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.5■□□□□ 0.55
PCK1P35558 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCK1P35558 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCK1P35558 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCK1P35558 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
PCK1P35558 AC141586.5-201ENST00000624546 2050 ntBASIC18.5■□□□□ 0.55
PCK1P35558 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PCK1P35558 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCK1P35558 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.49■□□□□ 0.55
PCK1P35558 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.49■□□□□ 0.55
PCK1P35558 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.49■□□□□ 0.55
PCK1P35558 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
PCK1P35558 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCK1P35558 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCK1P35558 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCK1P35558 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PCK1P35558 PP12613-201ENST00000424958 2230 ntBASIC18.49■□□□□ 0.55
PCK1P35558 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCK1P35558 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCK1P35558 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.49■□□□□ 0.55
PCK1P35558 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCK1P35558 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCK1P35558 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCK1P35558 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCK1P35558 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.49■□□□□ 0.55
PCK1P35558 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCK1P35558 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
PCK1P35558 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.49■□□□□ 0.55
PCK1P35558 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.49■□□□□ 0.55
PCK1P35558 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.49■□□□□ 0.55
PCK1P35558 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.49■□□□□ 0.55
PCK1P35558 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCK1P35558 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCK1P35558 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.49■□□□□ 0.55
PCK1P35558 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCK1P35558 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCK1P35558 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCK1P35558 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCK1P35558 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
PCK1P35558 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.48■□□□□ 0.55
PCK1P35558 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCK1P35558 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCK1P35558 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCK1P35558 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PCK1P35558 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.48■□□□□ 0.55
PCK1P35558 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.48■□□□□ 0.55
PCK1P35558 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.48■□□□□ 0.55
PCK1P35558 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PCK1P35558 AC124864.1-201ENST00000623408 392 ntBASIC18.48■□□□□ 0.55
PCK1P35558 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PCK1P35558 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.48■□□□□ 0.55
PCK1P35558 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
PCK1P35558 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCK1P35558 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCK1P35558 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCK1P35558 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCK1P35558 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCK1P35558 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCK1P35558 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCK1P35558 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PCK1P35558 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCK1P35558 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.47■□□□□ 0.55
PCK1P35558 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCK1P35558 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms