Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CLCN1P35523 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
CLCN1P35523 UNC93B2-201ENST00000285383 730 ntBASIC20.01■□□□□ 0.79
CLCN1P35523 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLCN1P35523 AL023284.2-201ENST00000405850 579 ntBASIC20.01■□□□□ 0.79
CLCN1P35523 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.01■□□□□ 0.79
CLCN1P35523 CA15P1-201ENST00000481698 905 ntBASIC20.01■□□□□ 0.79
CLCN1P35523 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.01■□□□□ 0.79
CLCN1P35523 MIR4785-201ENST00000585005 73 ntBASIC20.01■□□□□ 0.79
CLCN1P35523 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.01■□□□□ 0.79
CLCN1P35523 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.01■□□□□ 0.79
CLCN1P35523 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.01■□□□□ 0.79
CLCN1P35523 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.01■□□□□ 0.79
CLCN1P35523 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLCN1P35523 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLCN1P35523 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLCN1P35523 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLCN1P35523 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLCN1P35523 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLCN1P35523 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLCN1P35523 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN1P35523 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN1P35523 GPAT2P1-201ENST00000444924 1672 ntBASIC20■□□□□ 0.79
CLCN1P35523 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN1P35523 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CLCN1P35523 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20■□□□□ 0.79
CLCN1P35523 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CLCN1P35523 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN1P35523 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CLCN1P35523 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20■□□□□ 0.79
CLCN1P35523 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN1P35523 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20■□□□□ 0.79
CLCN1P35523 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN1P35523 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CLCN1P35523 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20■□□□□ 0.79
CLCN1P35523 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLCN1P35523 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN1P35523 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CLCN1P35523 AL355075.4-201ENST00000554988 638 ntBASIC20■□□□□ 0.79
CLCN1P35523 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN1P35523 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20■□□□□ 0.79
CLCN1P35523 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN1P35523 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CLCN1P35523 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20■□□□□ 0.79
CLCN1P35523 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN1P35523 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN1P35523 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN1P35523 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN1P35523 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN1P35523 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLCN1P35523 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CLCN1P35523 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN1P35523 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLCN1P35523 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLCN1P35523 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
CLCN1P35523 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCN1P35523 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.99■□□□□ 0.79
CLCN1P35523 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLCN1P35523 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.99■□□□□ 0.79
CLCN1P35523 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.99■□□□□ 0.79
CLCN1P35523 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCN1P35523 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC19.99■□□□□ 0.79
CLCN1P35523 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
CLCN1P35523 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.99■□□□□ 0.79
CLCN1P35523 AP000525.1-201ENST00000608286 694 ntBASIC19.99■□□□□ 0.79
CLCN1P35523 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLCN1P35523 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCN1P35523 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLCN1P35523 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLCN1P35523 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.99■□□□□ 0.79
CLCN1P35523 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCN1P35523 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLCN1P35523 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCN1P35523 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCN1P35523 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLCN1P35523 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.99■□□□□ 0.79
CLCN1P35523 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN1P35523 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.98■□□□□ 0.79
CLCN1P35523 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.98■□□□□ 0.79
CLCN1P35523 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN1P35523 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.98■□□□□ 0.79
CLCN1P35523 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN1P35523 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN1P35523 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN1P35523 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.98■□□□□ 0.79
CLCN1P35523 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.98■□□□□ 0.79
CLCN1P35523 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN1P35523 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.98■□□□□ 0.79
CLCN1P35523 AL390955.1-201ENST00000428694 934 ntBASIC19.98■□□□□ 0.79
CLCN1P35523 TSPY15P-201ENST00000457163 923 ntBASIC19.98■□□□□ 0.79
CLCN1P35523 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN1P35523 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN1P35523 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN1P35523 TSPY26P-202ENST00000565928 3884 ntBASIC19.98■□□□□ 0.79
CLCN1P35523 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN1P35523 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN1P35523 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN1P35523 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN1P35523 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.98■□□□□ 0.79
CLCN1P35523 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms