Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.53■□□□□ 0.56
CHRNA3P32297 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHRNA3P32297 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHRNA3P32297 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.53■□□□□ 0.56
CHRNA3P32297 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHRNA3P32297 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.53■□□□□ 0.56
CHRNA3P32297 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CHRNA3P32297 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.53■□□□□ 0.56
CHRNA3P32297 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.53■□□□□ 0.56
CHRNA3P32297 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.53■□□□□ 0.56
CHRNA3P32297 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CHRNA3P32297 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.53■□□□□ 0.56
CHRNA3P32297 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHRNA3P32297 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.53■□□□□ 0.56
CHRNA3P32297 AC009949.1-201ENST00000623048 1830 ntBASIC18.53■□□□□ 0.56
CHRNA3P32297 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHRNA3P32297 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
CHRNA3P32297 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHRNA3P32297 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHRNA3P32297 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHRNA3P32297 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CHRNA3P32297 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHRNA3P32297 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CHRNA3P32297 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CHRNA3P32297 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CHRNA3P32297 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHRNA3P32297 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHRNA3P32297 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.52■□□□□ 0.56
CHRNA3P32297 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CHRNA3P32297 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CHRNA3P32297 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.52■□□□□ 0.56
CHRNA3P32297 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.52■□□□□ 0.56
CHRNA3P32297 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.52■□□□□ 0.56
CHRNA3P32297 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
CHRNA3P32297 AC092119.3-201ENST00000612618 583 ntBASIC18.52■□□□□ 0.56
CHRNA3P32297 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CHRNA3P32297 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.52■□□□□ 0.56
CHRNA3P32297 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CHRNA3P32297 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CHRNA3P32297 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHRNA3P32297 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
CHRNA3P32297 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CHRNA3P32297 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.52■□□□□ 0.55
CHRNA3P32297 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CHRNA3P32297 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRNA3P32297 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRNA3P32297 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.51■□□□□ 0.55
CHRNA3P32297 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.51■□□□□ 0.55
CHRNA3P32297 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRNA3P32297 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.51■□□□□ 0.55
CHRNA3P32297 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRNA3P32297 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRNA3P32297 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRNA3P32297 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRNA3P32297 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRNA3P32297 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CHRNA3P32297 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRNA3P32297 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRNA3P32297 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRNA3P32297 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHRNA3P32297 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRNA3P32297 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRNA3P32297 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CHRNA3P32297 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.51■□□□□ 0.55
CHRNA3P32297 CHCHD2P8-201ENST00000429873 447 ntBASIC18.51■□□□□ 0.55
CHRNA3P32297 DDX43P3-201ENST00000441064 443 ntBASIC18.51■□□□□ 0.55
CHRNA3P32297 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.51■□□□□ 0.55
CHRNA3P32297 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.51■□□□□ 0.55
CHRNA3P32297 AL390719.2-201ENST00000606993 987 ntBASIC18.51■□□□□ 0.55
CHRNA3P32297 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHRNA3P32297 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CHRNA3P32297 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.51■□□□□ 0.55
CHRNA3P32297 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRNA3P32297 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.51■□□□□ 0.55
CHRNA3P32297 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CHRNA3P32297 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRNA3P32297 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CHRNA3P32297 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.51■□□□□ 0.55
CHRNA3P32297 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.51■□□□□ 0.55
CHRNA3P32297 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.51■□□□□ 0.55
CHRNA3P32297 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
CHRNA3P32297 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHRNA3P32297 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CHRNA3P32297 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CHRNA3P32297 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNA3P32297 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNA3P32297 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.5■□□□□ 0.55
CHRNA3P32297 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
CHRNA3P32297 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CHRNA3P32297 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
CHRNA3P32297 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNA3P32297 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.5■□□□□ 0.55
CHRNA3P32297 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.5■□□□□ 0.55
CHRNA3P32297 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNA3P32297 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CHRNA3P32297 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNA3P32297 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNA3P32297 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CHRNA3P32297 IGHGP-201ENST00000390555 1178 ntBASIC18.5■□□□□ 0.55
CHRNA3P32297 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms