Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GDF1P27539 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GDF1P27539 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
GDF1P27539 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
GDF1P27539 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.93■□□□□ 0.14
GDF1P27539 AC003669.1-201ENST00000334569 611 ntBASIC15.93■□□□□ 0.14
GDF1P27539 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GDF1P27539 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
GDF1P27539 AL022342.1-201ENST00000400363 863 ntBASIC15.93■□□□□ 0.14
GDF1P27539 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
GDF1P27539 AL020989.1-201ENST00000422979 469 ntBASIC15.93■□□□□ 0.14
GDF1P27539 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.93■□□□□ 0.14
GDF1P27539 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
GDF1P27539 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.93■□□□□ 0.14
GDF1P27539 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.93■□□□□ 0.14
GDF1P27539 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.93■□□□□ 0.14
GDF1P27539 AC025062.2-201ENST00000605477 670 ntBASIC15.93■□□□□ 0.14
GDF1P27539 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.93■□□□□ 0.14
GDF1P27539 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.93■□□□□ 0.14
GDF1P27539 FAM215A-202ENST00000632077 792 ntBASIC15.93■□□□□ 0.14
GDF1P27539 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
GDF1P27539 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.93■□□□□ 0.14
GDF1P27539 AL022326.1-202ENST00000641533 845 ntBASIC15.93■□□□□ 0.14
GDF1P27539 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
GDF1P27539 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GDF1P27539 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
GDF1P27539 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.93■□□□□ 0.14
GDF1P27539 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
GDF1P27539 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.93■□□□□ 0.14
GDF1P27539 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GDF1P27539 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GDF1P27539 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GDF1P27539 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GDF1P27539 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
GDF1P27539 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.93■□□□□ 0.14
GDF1P27539 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
GDF1P27539 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
GDF1P27539 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
GDF1P27539 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
GDF1P27539 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
GDF1P27539 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
GDF1P27539 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.92■□□□□ 0.14
GDF1P27539 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
GDF1P27539 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
GDF1P27539 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
GDF1P27539 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.92■□□□□ 0.14
GDF1P27539 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.92■□□□□ 0.14
GDF1P27539 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
GDF1P27539 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.92■□□□□ 0.14
GDF1P27539 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
GDF1P27539 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
GDF1P27539 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.92■□□□□ 0.14
GDF1P27539 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.92■□□□□ 0.14
GDF1P27539 HNRNPDP1-201ENST00000439535 754 ntBASIC15.92■□□□□ 0.14
GDF1P27539 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.92■□□□□ 0.14
GDF1P27539 AC002558.1-201ENST00000488906 803 ntBASIC15.92■□□□□ 0.14
GDF1P27539 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.92■□□□□ 0.14
GDF1P27539 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.92■□□□□ 0.14
GDF1P27539 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.92■□□□□ 0.14
GDF1P27539 MIR7706-201ENST00000613747 67 ntBASIC15.92■□□□□ 0.14
GDF1P27539 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
GDF1P27539 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
GDF1P27539 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
GDF1P27539 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.92■□□□□ 0.14
GDF1P27539 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GDF1P27539 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
GDF1P27539 AC004817.3-201ENST00000602957 2129 ntBASIC15.92■□□□□ 0.14
GDF1P27539 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.92■□□□□ 0.14
GDF1P27539 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
GDF1P27539 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
GDF1P27539 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GDF1P27539 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GDF1P27539 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
GDF1P27539 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.92■□□□□ 0.14
GDF1P27539 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
GDF1P27539 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
GDF1P27539 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
GDF1P27539 AC132938.5-201ENST00000624980 1813 ntBASIC15.91■□□□□ 0.14
GDF1P27539 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
GDF1P27539 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GDF1P27539 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
GDF1P27539 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GDF1P27539 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
GDF1P27539 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.91■□□□□ 0.14
GDF1P27539 AL390961.4-201ENST00000623958 2535 ntBASIC15.91■□□□□ 0.14
GDF1P27539 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GDF1P27539 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GDF1P27539 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GDF1P27539 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
GDF1P27539 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.91■□□□□ 0.14
GDF1P27539 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
GDF1P27539 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
GDF1P27539 STK19B-204ENST00000512515 211 ntBASIC15.91■□□□□ 0.14
GDF1P27539 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.91■□□□□ 0.14
GDF1P27539 RNA5SP419-201ENST00000515908 135 ntBASIC15.91■□□□□ 0.14
GDF1P27539 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.91■□□□□ 0.14
GDF1P27539 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.91■□□□□ 0.14
GDF1P27539 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.91■□□□□ 0.14
GDF1P27539 AL049840.3-201ENST00000602669 611 ntBASIC15.91■□□□□ 0.14
GDF1P27539 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms