Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.31■□□□□ 0.2
PRKCAP17252 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRKCAP17252 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRKCAP17252 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.31■□□□□ 0.2
PRKCAP17252 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRKCAP17252 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRKCAP17252 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRKCAP17252 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRKCAP17252 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.3■□□□□ 0.2
PRKCAP17252 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PRKCAP17252 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.3■□□□□ 0.2
PRKCAP17252 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.3■□□□□ 0.2
PRKCAP17252 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRKCAP17252 KRT18P55-202ENST00000578578 1546 ntBASIC16.3■□□□□ 0.2
PRKCAP17252 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRKCAP17252 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRKCAP17252 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRKCAP17252 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRKCAP17252 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.3■□□□□ 0.2
PRKCAP17252 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRKCAP17252 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRKCAP17252 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PRKCAP17252 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRKCAP17252 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PRKCAP17252 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRKCAP17252 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRKCAP17252 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRKCAP17252 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRKCAP17252 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRKCAP17252 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.3■□□□□ 0.2
PRKCAP17252 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.3■□□□□ 0.2
PRKCAP17252 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.3■□□□□ 0.2
PRKCAP17252 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRKCAP17252 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.3■□□□□ 0.2
PRKCAP17252 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.3■□□□□ 0.2
PRKCAP17252 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.3■□□□□ 0.2
PRKCAP17252 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.3■□□□□ 0.2
PRKCAP17252 AL121672.3-201ENST00000608644 468 ntBASIC16.3■□□□□ 0.2
PRKCAP17252 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRKCAP17252 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.3■□□□□ 0.2
PRKCAP17252 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRKCAP17252 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRKCAP17252 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRKCAP17252 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRKCAP17252 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRKCAP17252 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRKCAP17252 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRKCAP17252 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRKCAP17252 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.3■□□□□ 0.2
PRKCAP17252 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.3■□□□□ 0.2
PRKCAP17252 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PRKCAP17252 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
PRKCAP17252 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRKCAP17252 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PRKCAP17252 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRKCAP17252 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRKCAP17252 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRKCAP17252 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.29■□□□□ 0.2
PRKCAP17252 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRKCAP17252 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
PRKCAP17252 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.29■□□□□ 0.2
PRKCAP17252 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRKCAP17252 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRKCAP17252 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PRKCAP17252 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PRKCAP17252 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRKCAP17252 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRKCAP17252 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PRKCAP17252 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PRKCAP17252 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRKCAP17252 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.29■□□□□ 0.2
PRKCAP17252 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRKCAP17252 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRKCAP17252 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRKCAP17252 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRKCAP17252 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
PRKCAP17252 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRKCAP17252 BX276092.5-203ENST00000456199 560 ntBASIC16.29■□□□□ 0.2
PRKCAP17252 GUSBP12-201ENST00000513727 720 ntBASIC16.29■□□□□ 0.2
PRKCAP17252 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.29■□□□□ 0.2
PRKCAP17252 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.29■□□□□ 0.2
PRKCAP17252 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRKCAP17252 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PRKCAP17252 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.29■□□□□ 0.2
PRKCAP17252 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PRKCAP17252 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.29■□□□□ 0.2
PRKCAP17252 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRKCAP17252 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRKCAP17252 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.29■□□□□ 0.2
PRKCAP17252 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRKCAP17252 AC100803.2-201ENST00000562459 1963 ntBASIC16.29■□□□□ 0.2
PRKCAP17252 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRKCAP17252 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PRKCAP17252 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRKCAP17252 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PRKCAP17252 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.28■□□□□ 0.2
PRKCAP17252 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
PRKCAP17252 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRKCAP17252 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PRKCAP17252 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms