Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.44■□□□□ 0.06
UBCP0CG48 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBCP0CG48 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UBCP0CG48 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.43■□□□□ 0.06
UBCP0CG48 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBCP0CG48 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBCP0CG48 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBCP0CG48 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBCP0CG48 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBCP0CG48 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.43■□□□□ 0.06
UBCP0CG48 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBCP0CG48 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
UBCP0CG48 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBCP0CG48 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBCP0CG48 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
UBCP0CG48 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBCP0CG48 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UBCP0CG48 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UBCP0CG48 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UBCP0CG48 AC005104.2-201ENST00000427818 678 ntBASIC15.43■□□□□ 0.06
UBCP0CG48 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UBCP0CG48 AC112698.1-201ENST00000510299 916 ntBASIC15.43■□□□□ 0.06
UBCP0CG48 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
UBCP0CG48 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBCP0CG48 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UBCP0CG48 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.43■□□□□ 0.06
UBCP0CG48 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.43■□□□□ 0.06
UBCP0CG48 AC140113.3-201ENST00000605663 199 ntBASIC15.43■□□□□ 0.06
UBCP0CG48 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UBCP0CG48 AL138966.2-201ENST00000621997 464 ntBASIC15.43■□□□□ 0.06
UBCP0CG48 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UBCP0CG48 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UBCP0CG48 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBCP0CG48 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBCP0CG48 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.43■□□□□ 0.06
UBCP0CG48 AL162727.3-201ENST00000635661 2787 ntBASIC15.43■□□□□ 0.06
UBCP0CG48 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
UBCP0CG48 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UBCP0CG48 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UBCP0CG48 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBCP0CG48 AC022211.2-201ENST00000585075 2527 ntBASIC15.43■□□□□ 0.06
UBCP0CG48 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.43■□□□□ 0.06
UBCP0CG48 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UBCP0CG48 AL356309.3-201ENST00000624132 1934 ntBASIC15.43■□□□□ 0.06
UBCP0CG48 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UBCP0CG48 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
UBCP0CG48 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UBCP0CG48 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
UBCP0CG48 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
UBCP0CG48 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBCP0CG48 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UBCP0CG48 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
UBCP0CG48 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
UBCP0CG48 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UBCP0CG48 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UBCP0CG48 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBCP0CG48 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBCP0CG48 AC008894.3-201ENST00000624324 3103 ntBASIC15.42■□□□□ 0.06
UBCP0CG48 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
UBCP0CG48 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBCP0CG48 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UBCP0CG48 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBCP0CG48 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBCP0CG48 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
UBCP0CG48 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UBCP0CG48 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UBCP0CG48 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.42■□□□□ 0.06
UBCP0CG48 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBCP0CG48 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBCP0CG48 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.42■□□□□ 0.06
UBCP0CG48 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBCP0CG48 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBCP0CG48 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.42■□□□□ 0.06
UBCP0CG48 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBCP0CG48 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UBCP0CG48 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBCP0CG48 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UBCP0CG48 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBCP0CG48 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBCP0CG48 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.42■□□□□ 0.06
UBCP0CG48 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBCP0CG48 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UBCP0CG48 FAM8A6P-201ENST00000407496 1135 ntBASIC15.42■□□□□ 0.06
UBCP0CG48 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UBCP0CG48 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
UBCP0CG48 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
UBCP0CG48 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.42■□□□□ 0.06
UBCP0CG48 AC145285.6-201ENST00000604632 637 ntBASIC15.42■□□□□ 0.06
UBCP0CG48 AC004263.2-201ENST00000617183 678 ntBASIC15.42■□□□□ 0.06
UBCP0CG48 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
UBCP0CG48 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
UBCP0CG48 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBCP0CG48 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.42■□□□□ 0.06
UBCP0CG48 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UBCP0CG48 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBCP0CG48 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.42■□□□□ 0.06
UBCP0CG48 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBCP0CG48 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBCP0CG48 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.42■□□□□ 0.06
UBCP0CG48 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms