Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 TERF1P1-201ENST00000311003 1181 ntBASIC15.81■□□□□ 0.12
HLA-DPB1P04440 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 KRT18P57-201ENST00000443599 1254 ntBASIC15.81■□□□□ 0.12
HLA-DPB1P04440 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 AL024508.2-201ENST00000607749 1894 ntBASIC15.81■□□□□ 0.12
HLA-DPB1P04440 AC024243.1-201ENST00000609234 778 ntBASIC15.81■□□□□ 0.12
HLA-DPB1P04440 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 AC112497.1-201ENST00000624824 639 ntBASIC15.81■□□□□ 0.12
HLA-DPB1P04440 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HLA-DPB1P04440 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 AL138966.2-201ENST00000621997 464 ntBASIC15.8■□□□□ 0.12
HLA-DPB1P04440 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
HLA-DPB1P04440 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DPB1P04440 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms