Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.92■□□□□ 0.46
MT-ND3P03897 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.92■□□□□ 0.46
MT-ND3P03897 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND3P03897 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND3P03897 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND3P03897 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND3P03897 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND3P03897 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND3P03897 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND3P03897 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND3P03897 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND3P03897 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND3P03897 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND3P03897 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND3P03897 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.92■□□□□ 0.46
MT-ND3P03897 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.92■□□□□ 0.46
MT-ND3P03897 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
MT-ND3P03897 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.92■□□□□ 0.46
MT-ND3P03897 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
MT-ND3P03897 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND3P03897 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.92■□□□□ 0.46
MT-ND3P03897 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND3P03897 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.92■□□□□ 0.46
MT-ND3P03897 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.92■□□□□ 0.46
MT-ND3P03897 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND3P03897 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND3P03897 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.92■□□□□ 0.46
MT-ND3P03897 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND3P03897 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND3P03897 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND3P03897 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND3P03897 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
MT-ND3P03897 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-ND3P03897 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-ND3P03897 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
MT-ND3P03897 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.91■□□□□ 0.46
MT-ND3P03897 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.91■□□□□ 0.46
MT-ND3P03897 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-ND3P03897 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-ND3P03897 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-ND3P03897 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
MT-ND3P03897 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-ND3P03897 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-ND3P03897 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-ND3P03897 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-ND3P03897 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-ND3P03897 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.91■□□□□ 0.46
MT-ND3P03897 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.91■□□□□ 0.46
MT-ND3P03897 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MT-ND3P03897 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MT-ND3P03897 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.91■□□□□ 0.46
MT-ND3P03897 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.91■□□□□ 0.46
MT-ND3P03897 AC008687.5-201ENST00000593746 558 ntBASIC17.91■□□□□ 0.46
MT-ND3P03897 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MT-ND3P03897 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.91■□□□□ 0.46
MT-ND3P03897 LINC01451-201ENST00000623792 534 ntBASIC17.91■□□□□ 0.46
MT-ND3P03897 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-ND3P03897 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-ND3P03897 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-ND3P03897 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.91■□□□□ 0.46
MT-ND3P03897 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.91■□□□□ 0.46
MT-ND3P03897 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.9■□□□□ 0.46
MT-ND3P03897 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MT-ND3P03897 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.9■□□□□ 0.46
MT-ND3P03897 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.9■□□□□ 0.46
MT-ND3P03897 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.9■□□□□ 0.46
MT-ND3P03897 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
MT-ND3P03897 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MT-ND3P03897 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MT-ND3P03897 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
MT-ND3P03897 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
MT-ND3P03897 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
MT-ND3P03897 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MT-ND3P03897 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.9■□□□□ 0.46
MT-ND3P03897 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.9■□□□□ 0.46
MT-ND3P03897 AC112907.2-201ENST00000448639 330 ntBASIC17.9■□□□□ 0.46
MT-ND3P03897 AC034232.1-201ENST00000506026 1064 ntBASIC17.9■□□□□ 0.46
MT-ND3P03897 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.9■□□□□ 0.46
MT-ND3P03897 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.9■□□□□ 0.46
MT-ND3P03897 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
MT-ND3P03897 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.9■□□□□ 0.46
MT-ND3P03897 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.9■□□□□ 0.46
MT-ND3P03897 AL136038.3-201ENST00000561909 1096 ntBASIC17.9■□□□□ 0.46
MT-ND3P03897 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MT-ND3P03897 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
MT-ND3P03897 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.9■□□□□ 0.46
MT-ND3P03897 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MT-ND3P03897 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
MT-ND3P03897 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.9■□□□□ 0.46
MT-ND3P03897 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.9■□□□□ 0.46
MT-ND3P03897 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
MT-ND3P03897 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
MT-ND3P03897 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
MT-ND3P03897 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MT-ND3P03897 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MT-ND3P03897 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.89■□□□□ 0.45
MT-ND3P03897 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MT-ND3P03897 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
MT-ND3P03897 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
MT-ND3P03897 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms