Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DQA1P01909 UROS-202ENST00000368778 1556 ntTSL 2 BASIC13.24□□□□□ -0.29
HLA-DQA1P01909 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DQA1P01909 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 AC009102.3-201ENST00000623118 1491 ntBASIC13.23□□□□□ -0.29
HLA-DQA1P01909 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HLA-DQA1P01909 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 SDHAP2-201ENST00000455183 2001 ntBASIC13.22□□□□□ -0.29
HLA-DQA1P01909 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 DUTP2-201ENST00000519164 463 ntBASIC13.22□□□□□ -0.29
HLA-DQA1P01909 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 AC023824.1-201ENST00000562945 2975 ntBASIC13.22□□□□□ -0.29
HLA-DQA1P01909 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 KRT8P50-201ENST00000562022 1438 ntBASIC13.22□□□□□ -0.29
HLA-DQA1P01909 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
HLA-DQA1P01909 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HLA-DQA1P01909 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HLA-DQA1P01909 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.21□□□□□ -0.29
HLA-DQA1P01909 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC13.21□□□□□ -0.29
HLA-DQA1P01909 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HLA-DQA1P01909 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
HLA-DQA1P01909 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HLA-DQA1P01909 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HLA-DQA1P01909 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
HLA-DQA1P01909 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms