Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CNOT4O95628 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CNOT4O95628 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CNOT4O95628 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.64■□□□□ 0.09
CNOT4O95628 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CNOT4O95628 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CNOT4O95628 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.64■□□□□ 0.09
CNOT4O95628 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.64■□□□□ 0.09
CNOT4O95628 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.64■□□□□ 0.09
CNOT4O95628 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CNOT4O95628 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.64■□□□□ 0.09
CNOT4O95628 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CNOT4O95628 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CNOT4O95628 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.63■□□□□ 0.09
CNOT4O95628 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CNOT4O95628 BX276092.7-203ENST00000637198 1536 ntBASIC15.63■□□□□ 0.09
CNOT4O95628 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CNOT4O95628 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CNOT4O95628 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CNOT4O95628 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CNOT4O95628 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.63■□□□□ 0.09
CNOT4O95628 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.63■□□□□ 0.09
CNOT4O95628 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CNOT4O95628 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CNOT4O95628 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CNOT4O95628 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.63■□□□□ 0.09
CNOT4O95628 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.63■□□□□ 0.09
CNOT4O95628 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CNOT4O95628 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CNOT4O95628 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CNOT4O95628 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CNOT4O95628 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CNOT4O95628 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.63■□□□□ 0.09
CNOT4O95628 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CNOT4O95628 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.63■□□□□ 0.09
CNOT4O95628 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.63■□□□□ 0.09
CNOT4O95628 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.63■□□□□ 0.09
CNOT4O95628 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CNOT4O95628 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.63■□□□□ 0.09
CNOT4O95628 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CNOT4O95628 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.63■□□□□ 0.09
CNOT4O95628 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.63■□□□□ 0.09
CNOT4O95628 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.63■□□□□ 0.09
CNOT4O95628 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CNOT4O95628 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CNOT4O95628 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.63■□□□□ 0.09
CNOT4O95628 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CNOT4O95628 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CNOT4O95628 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CNOT4O95628 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.63■□□□□ 0.09
CNOT4O95628 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.63■□□□□ 0.09
CNOT4O95628 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CNOT4O95628 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CNOT4O95628 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.63■□□□□ 0.09
CNOT4O95628 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CNOT4O95628 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CNOT4O95628 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CNOT4O95628 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CNOT4O95628 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CNOT4O95628 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.62■□□□□ 0.09
CNOT4O95628 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CNOT4O95628 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CNOT4O95628 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.62■□□□□ 0.09
CNOT4O95628 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CNOT4O95628 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CNOT4O95628 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CNOT4O95628 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CNOT4O95628 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.62■□□□□ 0.09
CNOT4O95628 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.62■□□□□ 0.09
CNOT4O95628 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CNOT4O95628 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CNOT4O95628 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CNOT4O95628 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CNOT4O95628 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CNOT4O95628 ABCD1P5-201ENST00000445663 754 ntBASIC15.62■□□□□ 0.09
CNOT4O95628 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.62■□□□□ 0.09
CNOT4O95628 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.62■□□□□ 0.09
CNOT4O95628 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.62■□□□□ 0.09
CNOT4O95628 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.62■□□□□ 0.09
CNOT4O95628 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CNOT4O95628 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CNOT4O95628 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CNOT4O95628 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CNOT4O95628 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CNOT4O95628 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CNOT4O95628 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CNOT4O95628 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CNOT4O95628 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CNOT4O95628 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CNOT4O95628 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CNOT4O95628 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
CNOT4O95628 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CNOT4O95628 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CNOT4O95628 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CNOT4O95628 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CNOT4O95628 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.61■□□□□ 0.09
CNOT4O95628 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.61■□□□□ 0.09
CNOT4O95628 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.61■□□□□ 0.09
CNOT4O95628 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CNOT4O95628 MRPL3P1-201ENST00000400109 1033 ntBASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms