Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NKX2-2O95096 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NKX2-2O95096 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX2-2O95096 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
NKX2-2O95096 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX2-2O95096 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX2-2O95096 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NKX2-2O95096 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NKX2-2O95096 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.19■□□□□ 0.18
NKX2-2O95096 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.19■□□□□ 0.18
NKX2-2O95096 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.19■□□□□ 0.18
NKX2-2O95096 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.19■□□□□ 0.18
NKX2-2O95096 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.19■□□□□ 0.18
NKX2-2O95096 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NKX2-2O95096 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NKX2-2O95096 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.19■□□□□ 0.18
NKX2-2O95096 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
NKX2-2O95096 AC073592.5-201ENST00000624854 528 ntBASIC16.19■□□□□ 0.18
NKX2-2O95096 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.19■□□□□ 0.18
NKX2-2O95096 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NKX2-2O95096 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX2-2O95096 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX2-2O95096 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX2-2O95096 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX2-2O95096 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX2-2O95096 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.19■□□□□ 0.18
NKX2-2O95096 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NKX2-2O95096 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.19■□□□□ 0.18
NKX2-2O95096 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX2-2O95096 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NKX2-2O95096 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NKX2-2O95096 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.18■□□□□ 0.18
NKX2-2O95096 AC116353.5-201ENST00000638148 1699 ntBASIC16.18■□□□□ 0.18
NKX2-2O95096 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX2-2O95096 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX2-2O95096 AC009336.1-201ENST00000608941 1553 ntBASIC16.18■□□□□ 0.18
NKX2-2O95096 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX2-2O95096 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
NKX2-2O95096 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.18■□□□□ 0.18
NKX2-2O95096 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.18■□□□□ 0.18
NKX2-2O95096 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NKX2-2O95096 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.18■□□□□ 0.18
NKX2-2O95096 NUS1P2-201ENST00000417358 873 ntBASIC16.18■□□□□ 0.18
NKX2-2O95096 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX2-2O95096 HCG4P8-203ENST00000443049 980 ntBASIC16.18■□□□□ 0.18
NKX2-2O95096 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.18■□□□□ 0.18
NKX2-2O95096 NUS1P1-201ENST00000446295 882 ntBASIC16.18■□□□□ 0.18
NKX2-2O95096 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NKX2-2O95096 KRT16P4-201ENST00000453883 522 ntBASIC16.18■□□□□ 0.18
NKX2-2O95096 STK19B-204ENST00000512515 211 ntBASIC16.18■□□□□ 0.18
NKX2-2O95096 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NKX2-2O95096 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.18■□□□□ 0.18
NKX2-2O95096 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.18■□□□□ 0.18
NKX2-2O95096 AP000867.4-201ENST00000641616 219 ntBASIC16.18■□□□□ 0.18
NKX2-2O95096 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NKX2-2O95096 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX2-2O95096 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX2-2O95096 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX2-2O95096 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX2-2O95096 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.18■□□□□ 0.18
NKX2-2O95096 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX2-2O95096 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.18■□□□□ 0.18
NKX2-2O95096 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX2-2O95096 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX2-2O95096 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.18■□□□□ 0.18
NKX2-2O95096 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.18■□□□□ 0.18
NKX2-2O95096 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NKX2-2O95096 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX2-2O95096 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX2-2O95096 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX2-2O95096 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX2-2O95096 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX2-2O95096 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX2-2O95096 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX2-2O95096 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NKX2-2O95096 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.17■□□□□ 0.18
NKX2-2O95096 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX2-2O95096 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX2-2O95096 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
NKX2-2O95096 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX2-2O95096 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.17■□□□□ 0.18
NKX2-2O95096 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
NKX2-2O95096 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.17■□□□□ 0.18
NKX2-2O95096 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.17■□□□□ 0.18
NKX2-2O95096 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.17■□□□□ 0.18
NKX2-2O95096 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX2-2O95096 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.17■□□□□ 0.18
NKX2-2O95096 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.17■□□□□ 0.18
NKX2-2O95096 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX2-2O95096 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
NKX2-2O95096 AC020916.1-201ENST00000587762 1774 ntBASIC16.17■□□□□ 0.18
NKX2-2O95096 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX2-2O95096 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.17■□□□□ 0.18
NKX2-2O95096 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.17■□□□□ 0.18
NKX2-2O95096 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NKX2-2O95096 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NKX2-2O95096 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
NKX2-2O95096 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.16■□□□□ 0.18
NKX2-2O95096 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
NKX2-2O95096 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms