Protein–RNA interactions for Protein: O75452

RDH16, Retinol dehydrogenase 16, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH16O75452 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RDH16O75452 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.62■□□□□ 0.25
RDH16O75452 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RDH16O75452 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RDH16O75452 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RDH16O75452 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RDH16O75452 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
RDH16O75452 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RDH16O75452 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RDH16O75452 AC005104.2-201ENST00000427818 678 ntBASIC16.62■□□□□ 0.25
RDH16O75452 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RDH16O75452 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RDH16O75452 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.62■□□□□ 0.25
RDH16O75452 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.62■□□□□ 0.25
RDH16O75452 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RDH16O75452 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RDH16O75452 AL121912.1-201ENST00000603683 238 ntBASIC16.62■□□□□ 0.25
RDH16O75452 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RDH16O75452 PMPCAP1-201ENST00000508114 1576 ntBASIC16.62■□□□□ 0.25
RDH16O75452 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RDH16O75452 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RDH16O75452 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RDH16O75452 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RDH16O75452 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RDH16O75452 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RDH16O75452 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RDH16O75452 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RDH16O75452 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RDH16O75452 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RDH16O75452 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RDH16O75452 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.61■□□□□ 0.25
RDH16O75452 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.61■□□□□ 0.25
RDH16O75452 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RDH16O75452 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.61■□□□□ 0.25
RDH16O75452 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RDH16O75452 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RDH16O75452 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RDH16O75452 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.61■□□□□ 0.25
RDH16O75452 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RDH16O75452 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RDH16O75452 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RDH16O75452 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RDH16O75452 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.61■□□□□ 0.25
RDH16O75452 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
RDH16O75452 FGFR3P6-201ENST00000457012 610 ntBASIC16.61■□□□□ 0.25
RDH16O75452 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.61■□□□□ 0.25
RDH16O75452 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
RDH16O75452 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.61■□□□□ 0.25
RDH16O75452 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.61■□□□□ 0.25
RDH16O75452 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RDH16O75452 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.61■□□□□ 0.25
RDH16O75452 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RDH16O75452 LINC01451-201ENST00000623792 534 ntBASIC16.61■□□□□ 0.25
RDH16O75452 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RDH16O75452 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RDH16O75452 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RDH16O75452 AC132938.5-201ENST00000624980 1813 ntBASIC16.61■□□□□ 0.25
RDH16O75452 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RDH16O75452 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.61■□□□□ 0.25
RDH16O75452 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.6■□□□□ 0.25
RDH16O75452 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.6■□□□□ 0.25
RDH16O75452 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RDH16O75452 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RDH16O75452 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RDH16O75452 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RDH16O75452 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RDH16O75452 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RDH16O75452 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RDH16O75452 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RDH16O75452 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RDH16O75452 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RDH16O75452 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.6■□□□□ 0.25
RDH16O75452 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RDH16O75452 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.6■□□□□ 0.25
RDH16O75452 KLF4P1-201ENST00000412782 1185 ntBASIC16.6■□□□□ 0.25
RDH16O75452 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.6■□□□□ 0.25
RDH16O75452 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RDH16O75452 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.6■□□□□ 0.25
RDH16O75452 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RDH16O75452 TP73-AS1-207ENST00000624167 988 ntBASIC16.6■□□□□ 0.25
RDH16O75452 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RDH16O75452 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RDH16O75452 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
RDH16O75452 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
RDH16O75452 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RDH16O75452 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.6■□□□□ 0.25
RDH16O75452 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RDH16O75452 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
RDH16O75452 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RDH16O75452 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RDH16O75452 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.6■□□□□ 0.25
RDH16O75452 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RDH16O75452 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.6■□□□□ 0.25
RDH16O75452 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RDH16O75452 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RDH16O75452 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RDH16O75452 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RDH16O75452 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RDH16O75452 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RDH16O75452 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms