Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF40O75150 KRT18P23-201ENST00000435622 1283 ntBASIC18.99■□□□□ 0.63
RNF40O75150 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF40O75150 LINC00265-3P-201ENST00000447588 903 ntBASIC18.99■□□□□ 0.63
RNF40O75150 KRT17P6-201ENST00000453795 1220 ntBASIC18.99■□□□□ 0.63
RNF40O75150 AP000867.3-201ENST00000524675 377 ntBASIC18.99■□□□□ 0.63
RNF40O75150 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF40O75150 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.99■□□□□ 0.63
RNF40O75150 TPSP2-201ENST00000561760 610 ntBASIC18.99■□□□□ 0.63
RNF40O75150 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RNF40O75150 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.99■□□□□ 0.63
RNF40O75150 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF40O75150 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.99■□□□□ 0.63
RNF40O75150 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF40O75150 AL732292.2-201ENST00000609649 430 ntBASIC18.99■□□□□ 0.63
RNF40O75150 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RNF40O75150 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF40O75150 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
RNF40O75150 AL121761.2-201ENST00000598007 1648 ntBASIC18.99■□□□□ 0.63
RNF40O75150 RCC2P3-201ENST00000418112 1537 ntBASIC18.99■□□□□ 0.63
RNF40O75150 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF40O75150 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RNF40O75150 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
RNF40O75150 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF40O75150 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF40O75150 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF40O75150 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF40O75150 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF40O75150 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF40O75150 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF40O75150 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF40O75150 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF40O75150 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF40O75150 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF40O75150 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF40O75150 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF40O75150 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RNF40O75150 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF40O75150 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF40O75150 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF40O75150 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF40O75150 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RNF40O75150 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF40O75150 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF40O75150 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF40O75150 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.98■□□□□ 0.63
RNF40O75150 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF40O75150 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF40O75150 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF40O75150 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF40O75150 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF40O75150 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RNF40O75150 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.98■□□□□ 0.63
RNF40O75150 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
RNF40O75150 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RNF40O75150 AC008556.1-201ENST00000610908 2040 ntBASIC18.98■□□□□ 0.63
RNF40O75150 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF40O75150 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF40O75150 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.98■□□□□ 0.63
RNF40O75150 AL109659.2-201ENST00000606809 1674 ntBASIC18.98■□□□□ 0.63
RNF40O75150 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF40O75150 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
RNF40O75150 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.98■□□□□ 0.63
RNF40O75150 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF40O75150 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF40O75150 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF40O75150 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF40O75150 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF40O75150 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF40O75150 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF40O75150 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF40O75150 PCDH8P1-201ENST00000428983 2773 ntBASIC18.97■□□□□ 0.63
RNF40O75150 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF40O75150 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF40O75150 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF40O75150 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF40O75150 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RNF40O75150 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF40O75150 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF40O75150 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.97■□□□□ 0.63
RNF40O75150 DRAXINP1-201ENST00000437611 948 ntBASIC18.97■□□□□ 0.63
RNF40O75150 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.97■□□□□ 0.63
RNF40O75150 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF40O75150 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC18.97■□□□□ 0.63
RNF40O75150 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF40O75150 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF40O75150 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF40O75150 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF40O75150 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF40O75150 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF40O75150 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF40O75150 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF40O75150 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF40O75150 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF40O75150 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF40O75150 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF40O75150 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF40O75150 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF40O75150 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF40O75150 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms