Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCN2BO60939 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.67■□□□□ 0.26
SCN2BO60939 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SCN2BO60939 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SCN2BO60939 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCN2BO60939 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCN2BO60939 AC116353.5-201ENST00000638148 1699 ntBASIC16.67■□□□□ 0.26
SCN2BO60939 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SCN2BO60939 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SCN2BO60939 AC112907.2-201ENST00000448639 330 ntBASIC16.67■□□□□ 0.26
SCN2BO60939 HOMER2P1-201ENST00000455653 964 ntBASIC16.67■□□□□ 0.26
SCN2BO60939 VENTXP5-201ENST00000523979 775 ntBASIC16.67■□□□□ 0.26
SCN2BO60939 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SCN2BO60939 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.67■□□□□ 0.26
SCN2BO60939 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCN2BO60939 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SCN2BO60939 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SCN2BO60939 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCN2BO60939 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SCN2BO60939 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCN2BO60939 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCN2BO60939 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.67■□□□□ 0.26
SCN2BO60939 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCN2BO60939 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SCN2BO60939 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.67■□□□□ 0.26
SCN2BO60939 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
SCN2BO60939 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SCN2BO60939 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.66■□□□□ 0.26
SCN2BO60939 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCN2BO60939 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SCN2BO60939 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SCN2BO60939 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SCN2BO60939 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SCN2BO60939 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SCN2BO60939 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCN2BO60939 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SCN2BO60939 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCN2BO60939 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCN2BO60939 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.66■□□□□ 0.26
SCN2BO60939 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCN2BO60939 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.66■□□□□ 0.26
SCN2BO60939 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCN2BO60939 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SCN2BO60939 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
SCN2BO60939 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCN2BO60939 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.66■□□□□ 0.26
SCN2BO60939 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.66■□□□□ 0.26
SCN2BO60939 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.66■□□□□ 0.26
SCN2BO60939 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.66■□□□□ 0.26
SCN2BO60939 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.66■□□□□ 0.26
SCN2BO60939 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.66■□□□□ 0.26
SCN2BO60939 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SCN2BO60939 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.66■□□□□ 0.26
SCN2BO60939 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SCN2BO60939 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.66■□□□□ 0.26
SCN2BO60939 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.66■□□□□ 0.26
SCN2BO60939 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SCN2BO60939 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.66■□□□□ 0.26
SCN2BO60939 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCN2BO60939 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.66■□□□□ 0.26
SCN2BO60939 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.66■□□□□ 0.26
SCN2BO60939 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.66■□□□□ 0.26
SCN2BO60939 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCN2BO60939 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SCN2BO60939 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SCN2BO60939 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCN2BO60939 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SCN2BO60939 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SCN2BO60939 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN2BO60939 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN2BO60939 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.65■□□□□ 0.26
SCN2BO60939 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN2BO60939 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN2BO60939 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SCN2BO60939 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SCN2BO60939 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN2BO60939 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN2BO60939 AC010460.3-201ENST00000511359 1579 ntBASIC16.65■□□□□ 0.26
SCN2BO60939 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN2BO60939 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SCN2BO60939 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN2BO60939 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SCN2BO60939 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN2BO60939 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SCN2BO60939 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN2BO60939 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN2BO60939 AC084018.2-201ENST00000613093 2607 ntBASIC16.65■□□□□ 0.26
SCN2BO60939 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN2BO60939 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SCN2BO60939 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN2BO60939 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SCN2BO60939 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.65■□□□□ 0.26
SCN2BO60939 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.65■□□□□ 0.26
SCN2BO60939 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.65■□□□□ 0.26
SCN2BO60939 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.65■□□□□ 0.26
SCN2BO60939 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.65■□□□□ 0.26
SCN2BO60939 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.65■□□□□ 0.26
SCN2BO60939 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.65■□□□□ 0.26
SCN2BO60939 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
SCN2BO60939 AL139327.4-201ENST00000612362 153 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms