Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.11■□□□□ 0.49
TSPAN3O60637 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TSPAN3O60637 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.11■□□□□ 0.49
TSPAN3O60637 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TSPAN3O60637 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TSPAN3O60637 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TSPAN3O60637 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TSPAN3O60637 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.1■□□□□ 0.49
TSPAN3O60637 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TSPAN3O60637 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TSPAN3O60637 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.1■□□□□ 0.49
TSPAN3O60637 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.1■□□□□ 0.49
TSPAN3O60637 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TSPAN3O60637 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TSPAN3O60637 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.1■□□□□ 0.49
TSPAN3O60637 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TSPAN3O60637 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.1■□□□□ 0.49
TSPAN3O60637 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TSPAN3O60637 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TSPAN3O60637 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
TSPAN3O60637 SPDYE21P-201ENST00000413323 827 ntBASIC18.1■□□□□ 0.49
TSPAN3O60637 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.1■□□□□ 0.49
TSPAN3O60637 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TSPAN3O60637 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.1■□□□□ 0.49
TSPAN3O60637 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.1■□□□□ 0.49
TSPAN3O60637 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.1■□□□□ 0.49
TSPAN3O60637 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TSPAN3O60637 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TSPAN3O60637 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TSPAN3O60637 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TSPAN3O60637 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TSPAN3O60637 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TSPAN3O60637 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TSPAN3O60637 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TSPAN3O60637 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TSPAN3O60637 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TSPAN3O60637 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.09■□□□□ 0.49
TSPAN3O60637 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
TSPAN3O60637 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
TSPAN3O60637 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TSPAN3O60637 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TSPAN3O60637 AC148477.5-201ENST00000625164 1645 ntBASIC18.09■□□□□ 0.49
TSPAN3O60637 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.09■□□□□ 0.49
TSPAN3O60637 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TSPAN3O60637 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.09■□□□□ 0.49
TSPAN3O60637 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TSPAN3O60637 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.09■□□□□ 0.49
TSPAN3O60637 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TSPAN3O60637 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.09■□□□□ 0.49
TSPAN3O60637 KLF4P1-201ENST00000412782 1185 ntBASIC18.09■□□□□ 0.49
TSPAN3O60637 IGHV3-52-201ENST00000519770 353 ntBASIC18.09■□□□□ 0.49
TSPAN3O60637 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.09■□□□□ 0.49
TSPAN3O60637 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.09■□□□□ 0.49
TSPAN3O60637 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.09■□□□□ 0.49
TSPAN3O60637 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.09■□□□□ 0.49
TSPAN3O60637 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
TSPAN3O60637 AC012640.2-201ENST00000561606 901 ntBASIC18.09■□□□□ 0.49
TSPAN3O60637 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TSPAN3O60637 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.09■□□□□ 0.49
TSPAN3O60637 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TSPAN3O60637 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.09■□□□□ 0.49
TSPAN3O60637 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.09■□□□□ 0.49
TSPAN3O60637 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.09■□□□□ 0.49
TSPAN3O60637 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.09■□□□□ 0.49
TSPAN3O60637 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.09■□□□□ 0.49
TSPAN3O60637 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TSPAN3O60637 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TSPAN3O60637 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.09■□□□□ 0.49
TSPAN3O60637 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TSPAN3O60637 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.09■□□□□ 0.49
TSPAN3O60637 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TSPAN3O60637 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TSPAN3O60637 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TSPAN3O60637 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TSPAN3O60637 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
TSPAN3O60637 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TSPAN3O60637 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
TSPAN3O60637 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
TSPAN3O60637 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.08■□□□□ 0.48
TSPAN3O60637 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TSPAN3O60637 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
TSPAN3O60637 RPS2P28-201ENST00000314255 741 ntBASIC18.08■□□□□ 0.48
TSPAN3O60637 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.08■□□□□ 0.48
TSPAN3O60637 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TSPAN3O60637 AL020989.1-201ENST00000422979 469 ntBASIC18.08■□□□□ 0.48
TSPAN3O60637 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.08■□□□□ 0.48
TSPAN3O60637 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.08■□□□□ 0.48
TSPAN3O60637 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.08■□□□□ 0.48
TSPAN3O60637 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.08■□□□□ 0.48
TSPAN3O60637 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
TSPAN3O60637 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.08■□□□□ 0.48
TSPAN3O60637 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.08■□□□□ 0.48
TSPAN3O60637 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TSPAN3O60637 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.08■□□□□ 0.48
TSPAN3O60637 AC116407.3-201ENST00000623905 1129 ntBASIC18.08■□□□□ 0.48
TSPAN3O60637 AL022326.1-202ENST00000641533 845 ntBASIC18.08■□□□□ 0.48
TSPAN3O60637 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TSPAN3O60637 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TSPAN3O60637 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TSPAN3O60637 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms