Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRGAP3O43295 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SRGAP3O43295 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SRGAP3O43295 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SRGAP3O43295 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC21.77■■□□□ 1.08
SRGAP3O43295 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SRGAP3O43295 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.77■■□□□ 1.08
SRGAP3O43295 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SRGAP3O43295 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SRGAP3O43295 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SRGAP3O43295 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC21.77■■□□□ 1.08
SRGAP3O43295 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
SRGAP3O43295 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SRGAP3O43295 FAM197Y8-203ENST00000450145 560 ntBASIC21.77■■□□□ 1.08
SRGAP3O43295 AC009078.2-202ENST00000463353 338 ntBASIC21.77■■□□□ 1.08
SRGAP3O43295 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC21.77■■□□□ 1.08
SRGAP3O43295 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC21.77■■□□□ 1.08
SRGAP3O43295 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.77■■□□□ 1.08
SRGAP3O43295 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.77■■□□□ 1.08
SRGAP3O43295 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC21.77■■□□□ 1.08
SRGAP3O43295 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SRGAP3O43295 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SRGAP3O43295 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC21.77■■□□□ 1.07
SRGAP3O43295 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.77■■□□□ 1.07
SRGAP3O43295 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SRGAP3O43295 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SRGAP3O43295 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.76■■□□□ 1.07
SRGAP3O43295 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SRGAP3O43295 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SRGAP3O43295 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC21.76■■□□□ 1.07
SRGAP3O43295 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SRGAP3O43295 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SRGAP3O43295 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SRGAP3O43295 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SRGAP3O43295 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SRGAP3O43295 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SRGAP3O43295 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SRGAP3O43295 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SRGAP3O43295 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC21.76■■□□□ 1.07
SRGAP3O43295 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SRGAP3O43295 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SRGAP3O43295 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.76■■□□□ 1.07
SRGAP3O43295 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SRGAP3O43295 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC21.76■■□□□ 1.07
SRGAP3O43295 AC021087.4-201ENST00000563761 564 ntBASIC21.76■■□□□ 1.07
SRGAP3O43295 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC21.76■■□□□ 1.07
SRGAP3O43295 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.76■■□□□ 1.07
SRGAP3O43295 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SRGAP3O43295 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.76■■□□□ 1.07
SRGAP3O43295 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SRGAP3O43295 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SRGAP3O43295 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SRGAP3O43295 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
SRGAP3O43295 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SRGAP3O43295 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SRGAP3O43295 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SRGAP3O43295 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SRGAP3O43295 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SRGAP3O43295 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
SRGAP3O43295 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SRGAP3O43295 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
SRGAP3O43295 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SRGAP3O43295 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SRGAP3O43295 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC21.75■■□□□ 1.07
SRGAP3O43295 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SRGAP3O43295 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SRGAP3O43295 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SRGAP3O43295 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SRGAP3O43295 MRPL3P1-201ENST00000400109 1033 ntBASIC21.75■■□□□ 1.07
SRGAP3O43295 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SRGAP3O43295 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SRGAP3O43295 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SRGAP3O43295 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21.75■■□□□ 1.07
SRGAP3O43295 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC21.75■■□□□ 1.07
SRGAP3O43295 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SRGAP3O43295 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SRGAP3O43295 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.75■■□□□ 1.07
SRGAP3O43295 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SRGAP3O43295 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SRGAP3O43295 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SRGAP3O43295 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SRGAP3O43295 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC21.75■■□□□ 1.07
SRGAP3O43295 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SRGAP3O43295 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SRGAP3O43295 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SRGAP3O43295 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SRGAP3O43295 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SRGAP3O43295 AC046185.3-201ENST00000623228 1824 ntBASIC21.74■■□□□ 1.07
SRGAP3O43295 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SRGAP3O43295 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC21.74■■□□□ 1.07
SRGAP3O43295 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
SRGAP3O43295 AC026396.1-201ENST00000419388 421 ntBASIC21.74■■□□□ 1.07
SRGAP3O43295 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC21.74■■□□□ 1.07
SRGAP3O43295 RNPS1P1-201ENST00000507437 918 ntBASIC21.74■■□□□ 1.07
SRGAP3O43295 MOK-208ENST00000519058 917 ntTSL 2 BASIC21.74■■□□□ 1.07
SRGAP3O43295 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.74■■□□□ 1.07
SRGAP3O43295 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC21.74■■□□□ 1.07
SRGAP3O43295 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC21.74■■□□□ 1.07
SRGAP3O43295 CYB561-217ENST00000582997 877 ntTSL 5 BASIC21.74■■□□□ 1.07
SRGAP3O43295 COPE-211ENST00000600932 1144 ntTSL 5 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms