Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TNRC18O15417 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNRC18O15417 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNRC18O15417 WASH6P-202ENST00000359512 1437 ntBASIC18.83■□□□□ 0.6
TNRC18O15417 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TNRC18O15417 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TNRC18O15417 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
TNRC18O15417 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC18.83■□□□□ 0.6
TNRC18O15417 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.83■□□□□ 0.6
TNRC18O15417 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNRC18O15417 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TNRC18O15417 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
TNRC18O15417 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.82■□□□□ 0.6
TNRC18O15417 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNRC18O15417 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.82■□□□□ 0.6
TNRC18O15417 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.82■□□□□ 0.6
TNRC18O15417 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.82■□□□□ 0.6
TNRC18O15417 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC18.82■□□□□ 0.6
TNRC18O15417 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
TNRC18O15417 AC007431.3-201ENST00000623221 587 ntBASIC18.82■□□□□ 0.6
TNRC18O15417 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNRC18O15417 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TNRC18O15417 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNRC18O15417 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNRC18O15417 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNRC18O15417 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNRC18O15417 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNRC18O15417 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNRC18O15417 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNRC18O15417 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC18.82■□□□□ 0.6
TNRC18O15417 SLC25A6P2-201ENST00000497974 877 ntBASIC18.82■□□□□ 0.6
TNRC18O15417 IGHV3-62-201ENST00000520057 340 ntBASIC18.82■□□□□ 0.6
TNRC18O15417 MBP-227ENST00000526111 581 ntTSL 4 BASIC18.82■□□□□ 0.6
TNRC18O15417 MIR5572-201ENST00000583188 137 ntBASIC18.82■□□□□ 0.6
TNRC18O15417 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.82■□□□□ 0.6
TNRC18O15417 AL158211.5-201ENST00000623583 2518 ntBASIC18.82■□□□□ 0.6
TNRC18O15417 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNRC18O15417 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.82■□□□□ 0.6
TNRC18O15417 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNRC18O15417 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TNRC18O15417 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNRC18O15417 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TNRC18O15417 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.81■□□□□ 0.6
TNRC18O15417 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.81■□□□□ 0.6
TNRC18O15417 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TNRC18O15417 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.81■□□□□ 0.6
TNRC18O15417 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNRC18O15417 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TNRC18O15417 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNRC18O15417 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNRC18O15417 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TNRC18O15417 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNRC18O15417 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TNRC18O15417 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.81■□□□□ 0.6
TNRC18O15417 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNRC18O15417 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNRC18O15417 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNRC18O15417 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.81■□□□□ 0.6
TNRC18O15417 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNRC18O15417 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.81■□□□□ 0.6
TNRC18O15417 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TNRC18O15417 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNRC18O15417 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.81■□□□□ 0.6
TNRC18O15417 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNRC18O15417 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNRC18O15417 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TNRC18O15417 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC18.81■□□□□ 0.6
TNRC18O15417 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.81■□□□□ 0.6
TNRC18O15417 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.81■□□□□ 0.6
TNRC18O15417 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.81■□□□□ 0.6
TNRC18O15417 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TNRC18O15417 AC093525.8-201ENST00000624099 1342 ntBASIC18.81■□□□□ 0.6
TNRC18O15417 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNRC18O15417 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TNRC18O15417 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNRC18O15417 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNRC18O15417 AC087163.2-201ENST00000457299 853 ntBASIC18.8■□□□□ 0.6
TNRC18O15417 HLA-V-204ENST00000476601 1289 ntBASIC18.8■□□□□ 0.6
TNRC18O15417 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC18.8■□□□□ 0.6
TNRC18O15417 ZNF890P-202ENST00000530367 1156 ntBASIC18.8■□□□□ 0.6
TNRC18O15417 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.8■□□□□ 0.6
TNRC18O15417 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TNRC18O15417 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TNRC18O15417 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.8■□□□□ 0.6
TNRC18O15417 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNRC18O15417 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TNRC18O15417 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNRC18O15417 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNRC18O15417 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TNRC18O15417 STK25P1-201ENST00000585406 838 ntBASIC18.8■□□□□ 0.6
TNRC18O15417 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.8■□□□□ 0.6
TNRC18O15417 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TNRC18O15417 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TNRC18O15417 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TNRC18O15417 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TNRC18O15417 COX5BP2-201ENST00000392354 334 ntBASIC18.79■□□□□ 0.6
TNRC18O15417 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TNRC18O15417 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
TNRC18O15417 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
TNRC18O15417 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms