Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 DUX4L27-201ENST00000554796 1261 ntBASIC20.93■□□□□ 0.94
FOXN1O15353 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.93■□□□□ 0.94
FOXN1O15353 AC006557.2-201ENST00000592985 1240 ntBASIC20.93■□□□□ 0.94
FOXN1O15353 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.93■□□□□ 0.94
FOXN1O15353 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.93■□□□□ 0.94
FOXN1O15353 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
FOXN1O15353 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
FOXN1O15353 AL513210.1-201ENST00000629608 234 ntBASIC20.93■□□□□ 0.94
FOXN1O15353 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.93■□□□□ 0.94
FOXN1O15353 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
FOXN1O15353 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FOXN1O15353 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FOXN1O15353 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FOXN1O15353 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FOXN1O15353 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.93■□□□□ 0.94
FOXN1O15353 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
FOXN1O15353 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
FOXN1O15353 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
FOXN1O15353 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
FOXN1O15353 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FOXN1O15353 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
FOXN1O15353 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
FOXN1O15353 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FOXN1O15353 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FOXN1O15353 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
FOXN1O15353 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
FOXN1O15353 CBR1-202ENST00000399191 838 ntTSL 3 BASIC20.92■□□□□ 0.94
FOXN1O15353 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FOXN1O15353 ELK2BP-201ENST00000415014 1224 ntBASIC20.92■□□□□ 0.94
FOXN1O15353 TSPY16P-201ENST00000449843 468 ntBASIC20.92■□□□□ 0.94
FOXN1O15353 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.92■□□□□ 0.94
FOXN1O15353 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.92■□□□□ 0.94
FOXN1O15353 BX005266.1-201ENST00000473402 457 ntBASIC20.92■□□□□ 0.94
FOXN1O15353 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FOXN1O15353 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC20.92■□□□□ 0.94
FOXN1O15353 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
FOXN1O15353 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FOXN1O15353 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FOXN1O15353 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.92■□□□□ 0.94
FOXN1O15353 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.92■□□□□ 0.94
FOXN1O15353 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
FOXN1O15353 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.92■□□□□ 0.94
FOXN1O15353 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FOXN1O15353 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
FOXN1O15353 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXN1O15353 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXN1O15353 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXN1O15353 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXN1O15353 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXN1O15353 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC20.91■□□□□ 0.94
FOXN1O15353 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.91■□□□□ 0.94
FOXN1O15353 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FOXN1O15353 AC004461.1-201ENST00000412461 403 ntBASIC20.91■□□□□ 0.94
FOXN1O15353 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
FOXN1O15353 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.91■□□□□ 0.94
FOXN1O15353 AC125634.1-201ENST00000438758 1403 ntBASIC20.91■□□□□ 0.94
FOXN1O15353 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FOXN1O15353 HCG4B-203ENST00000450128 991 ntBASIC20.91■□□□□ 0.94
FOXN1O15353 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FOXN1O15353 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FOXN1O15353 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC20.91■□□□□ 0.94
FOXN1O15353 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FOXN1O15353 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.91■□□□□ 0.94
FOXN1O15353 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC20.91■□□□□ 0.94
FOXN1O15353 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC20.91■□□□□ 0.94
FOXN1O15353 MIR6799-201ENST00000620297 69 ntBASIC20.91■□□□□ 0.94
FOXN1O15353 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
FOXN1O15353 AC067852.2-201ENST00000590513 2313 ntBASIC20.9■□□□□ 0.94
FOXN1O15353 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
FOXN1O15353 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN1O15353 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN1O15353 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN1O15353 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN1O15353 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.9■□□□□ 0.94
FOXN1O15353 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.9■□□□□ 0.94
FOXN1O15353 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN1O15353 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC20.9■□□□□ 0.94
FOXN1O15353 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.9■□□□□ 0.94
FOXN1O15353 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.9■□□□□ 0.94
FOXN1O15353 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC20.9■□□□□ 0.94
FOXN1O15353 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.9■□□□□ 0.94
FOXN1O15353 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC20.9■□□□□ 0.94
FOXN1O15353 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN1O15353 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.9■□□□□ 0.94
FOXN1O15353 LINC00628-201ENST00000628516 1289 ntBASIC20.9■□□□□ 0.94
FOXN1O15353 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.9■□□□□ 0.94
FOXN1O15353 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
FOXN1O15353 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN1O15353 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN1O15353 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
FOXN1O15353 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.9■□□□□ 0.94
FOXN1O15353 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
FOXN1O15353 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
FOXN1O15353 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.89■□□□□ 0.94
FOXN1O15353 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
FOXN1O15353 LETM1P2-201ENST00000597330 2178 ntBASIC20.89■□□□□ 0.94
FOXN1O15353 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
FOXN1O15353 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXN1O15353 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
FOXN1O15353 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms