Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
CHD1O14646 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CHD1O14646 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CHD1O14646 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
CHD1O14646 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
CHD1O14646 TMEM14DP-201ENST00000422205 345 ntBASIC28.04■■■□□ 2.08
CHD1O14646 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC28.04■■■□□ 2.08
CHD1O14646 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
CHD1O14646 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC28.04■■■□□ 2.08
CHD1O14646 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
CHD1O14646 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC28.03■■■□□ 2.08
CHD1O14646 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CHD1O14646 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
CHD1O14646 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CHD1O14646 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC28.03■■■□□ 2.08
CHD1O14646 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC28.03■■■□□ 2.08
CHD1O14646 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
CHD1O14646 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CHD1O14646 AC106886.1-201ENST00000568660 600 ntBASIC28.03■■■□□ 2.08
CHD1O14646 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC28.03■■■□□ 2.08
CHD1O14646 APOC4-201ENST00000591600 348 ntTSL 3 BASIC28.03■■■□□ 2.08
CHD1O14646 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC28.03■■■□□ 2.08
CHD1O14646 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CHD1O14646 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CHD1O14646 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC28.03■■■□□ 2.08
CHD1O14646 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CHD1O14646 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
CHD1O14646 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC28.03■■■□□ 2.08
CHD1O14646 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC28.03■■■□□ 2.08
CHD1O14646 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC28.02■■■□□ 2.08
CHD1O14646 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CHD1O14646 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
CHD1O14646 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CHD1O14646 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC28.02■■■□□ 2.08
CHD1O14646 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CHD1O14646 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC28.02■■■□□ 2.08
CHD1O14646 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC28.02■■■□□ 2.08
CHD1O14646 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CHD1O14646 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CHD1O14646 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC28.02■■■□□ 2.08
CHD1O14646 MPV17-208ENST00000405076 603 ntTSL 5 BASIC28.02■■■□□ 2.08
CHD1O14646 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
CHD1O14646 PRR29-204ENST00000577953 565 ntTSL 4 BASIC28.02■■■□□ 2.08
CHD1O14646 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CHD1O14646 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CHD1O14646 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CHD1O14646 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
CHD1O14646 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CHD1O14646 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC28.02■■■□□ 2.08
CHD1O14646 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
CHD1O14646 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CHD1O14646 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
CHD1O14646 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.08
CHD1O14646 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC28.01■■■□□ 2.08
CHD1O14646 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CHD1O14646 ENSA-206ENST00000361631 725 ntTSL 2 BASIC28.01■■■□□ 2.07
CHD1O14646 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC28.01■■■□□ 2.07
CHD1O14646 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC28.01■■■□□ 2.07
CHD1O14646 NARF-206ENST00000457415 1668 ntTSL 5 BASIC28.01■■■□□ 2.07
CHD1O14646 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CHD1O14646 AL133338.1-201ENST00000565695 1517 ntBASIC28.01■■■□□ 2.07
CHD1O14646 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CHD1O14646 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.07
CHD1O14646 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
CHD1O14646 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CHD1O14646 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC28.01■■■□□ 2.07
CHD1O14646 PACS1-203ENST00000524815 628 ntTSL 4 BASIC28.01■■■□□ 2.07
CHD1O14646 AC109635.5-201ENST00000533593 962 ntBASIC28.01■■■□□ 2.07
CHD1O14646 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC28.01■■■□□ 2.07
CHD1O14646 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
CHD1O14646 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CHD1O14646 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC28■■■□□ 2.07
CHD1O14646 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC28■■■□□ 2.07
CHD1O14646 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC28■■■□□ 2.07
CHD1O14646 RN7SL837P-201ENST00000463010 287 ntBASIC28■■■□□ 2.07
CHD1O14646 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC28■■■□□ 2.07
CHD1O14646 KRT17P8-201ENST00000540749 863 ntBASIC28■■■□□ 2.07
CHD1O14646 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC28■■■□□ 2.07
CHD1O14646 TEX28P1-201ENST00000613479 1221 ntBASIC28■■■□□ 2.07
CHD1O14646 TEX28P2-201ENST00000617764 1221 ntBASIC28■■■□□ 2.07
CHD1O14646 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC28■■■□□ 2.07
CHD1O14646 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CHD1O14646 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC27.99■■■□□ 2.07
CHD1O14646 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CHD1O14646 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC27.99■■■□□ 2.07
CHD1O14646 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC27.99■■■□□ 2.07
CHD1O14646 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC27.99■■■□□ 2.07
CHD1O14646 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC27.99■■■□□ 2.07
CHD1O14646 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC27.99■■■□□ 2.07
CHD1O14646 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CHD1O14646 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
CHD1O14646 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC27.99■■■□□ 2.07
CHD1O14646 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC27.99■■■□□ 2.07
CHD1O14646 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC27.99■■■□□ 2.07
CHD1O14646 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CHD1O14646 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CHD1O14646 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC27.98■■■□□ 2.07
CHD1O14646 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC27.98■■■□□ 2.07
CHD1O14646 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC27.98■■■□□ 2.07
CHD1O14646 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC27.98■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms