Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3D1O14617 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.47■□□□□ 0.23
AP3D1O14617 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
AP3D1O14617 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.47■□□□□ 0.23
AP3D1O14617 AC112907.2-201ENST00000448639 330 ntBASIC16.47■□□□□ 0.23
AP3D1O14617 HOMER2P1-201ENST00000455653 964 ntBASIC16.47■□□□□ 0.23
AP3D1O14617 AC092647.4-201ENST00000457211 535 ntBASIC16.47■□□□□ 0.23
AP3D1O14617 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
AP3D1O14617 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.47■□□□□ 0.23
AP3D1O14617 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.47■□□□□ 0.23
AP3D1O14617 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
AP3D1O14617 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.47■□□□□ 0.23
AP3D1O14617 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
AP3D1O14617 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
AP3D1O14617 AL023806.1-201ENST00000603994 1649 ntBASIC16.47■□□□□ 0.23
AP3D1O14617 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.47■□□□□ 0.23
AP3D1O14617 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3D1O14617 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
AP3D1O14617 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3D1O14617 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3D1O14617 AC108860.2-201ENST00000562760 2183 ntBASIC16.47■□□□□ 0.23
AP3D1O14617 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.47■□□□□ 0.23
AP3D1O14617 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
AP3D1O14617 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
AP3D1O14617 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP3D1O14617 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.46■□□□□ 0.23
AP3D1O14617 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.46■□□□□ 0.23
AP3D1O14617 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3D1O14617 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3D1O14617 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
AP3D1O14617 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3D1O14617 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3D1O14617 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.46■□□□□ 0.23
AP3D1O14617 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.46■□□□□ 0.23
AP3D1O14617 AL391005.1-201ENST00000623953 2435 ntBASIC16.46■□□□□ 0.23
AP3D1O14617 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
AP3D1O14617 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
AP3D1O14617 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
AP3D1O14617 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3D1O14617 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3D1O14617 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
AP3D1O14617 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
AP3D1O14617 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.46■□□□□ 0.23
AP3D1O14617 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
AP3D1O14617 VENTXP5-201ENST00000523979 775 ntBASIC16.46■□□□□ 0.23
AP3D1O14617 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.46■□□□□ 0.23
AP3D1O14617 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.46■□□□□ 0.23
AP3D1O14617 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
AP3D1O14617 AC004263.2-201ENST00000617183 678 ntBASIC16.46■□□□□ 0.23
AP3D1O14617 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.46■□□□□ 0.23
AP3D1O14617 HYMAI.1-201ENST00000620949 238 ntBASIC16.46■□□□□ 0.23
AP3D1O14617 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.46■□□□□ 0.23
AP3D1O14617 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
AP3D1O14617 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
AP3D1O14617 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3D1O14617 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
AP3D1O14617 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3D1O14617 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.46■□□□□ 0.22
AP3D1O14617 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
AP3D1O14617 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
AP3D1O14617 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
AP3D1O14617 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3D1O14617 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP3D1O14617 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.45■□□□□ 0.22
AP3D1O14617 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3D1O14617 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3D1O14617 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
AP3D1O14617 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3D1O14617 AC022211.2-201ENST00000585075 2527 ntBASIC16.45■□□□□ 0.22
AP3D1O14617 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.45■□□□□ 0.22
AP3D1O14617 HBZP1-201ENST00000354915 429 ntBASIC16.45■□□□□ 0.22
AP3D1O14617 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.45■□□□□ 0.22
AP3D1O14617 FAM8A6P-201ENST00000407496 1135 ntBASIC16.45■□□□□ 0.22
AP3D1O14617 TMPOP1-202ENST00000424642 1267 ntBASIC16.45■□□□□ 0.22
AP3D1O14617 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
AP3D1O14617 KRT18P48-201ENST00000434763 852 ntBASIC16.45■□□□□ 0.22
AP3D1O14617 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP3D1O14617 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.45■□□□□ 0.22
AP3D1O14617 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
AP3D1O14617 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.45■□□□□ 0.22
AP3D1O14617 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.45■□□□□ 0.22
AP3D1O14617 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.45■□□□□ 0.22
AP3D1O14617 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP3D1O14617 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.45■□□□□ 0.22
AP3D1O14617 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
AP3D1O14617 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.45■□□□□ 0.22
AP3D1O14617 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
AP3D1O14617 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.45■□□□□ 0.22
AP3D1O14617 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3D1O14617 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
AP3D1O14617 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
AP3D1O14617 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3D1O14617 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
AP3D1O14617 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3D1O14617 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3D1O14617 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3D1O14617 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.45■□□□□ 0.22
AP3D1O14617 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP3D1O14617 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.45■□□□□ 0.22
AP3D1O14617 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms