Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 TSPY7P-201ENST00000431358 1114 ntBASIC17.58■□□□□ 0.4
COPEO14579 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.58■□□□□ 0.4
COPEO14579 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
COPEO14579 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.58■□□□□ 0.4
COPEO14579 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.58■□□□□ 0.4
COPEO14579 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
COPEO14579 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.58■□□□□ 0.4
COPEO14579 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.58■□□□□ 0.4
COPEO14579 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.58■□□□□ 0.4
COPEO14579 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COPEO14579 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.58■□□□□ 0.4
COPEO14579 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COPEO14579 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COPEO14579 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COPEO14579 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
COPEO14579 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COPEO14579 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COPEO14579 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COPEO14579 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COPEO14579 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COPEO14579 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COPEO14579 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COPEO14579 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COPEO14579 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
COPEO14579 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.57■□□□□ 0.4
COPEO14579 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPEO14579 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPEO14579 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COPEO14579 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COPEO14579 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.57■□□□□ 0.4
COPEO14579 LINC01311-201ENST00000565162 1445 ntBASIC17.57■□□□□ 0.4
COPEO14579 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPEO14579 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.57■□□□□ 0.4
COPEO14579 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPEO14579 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COPEO14579 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPEO14579 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPEO14579 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.57■□□□□ 0.4
COPEO14579 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COPEO14579 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
COPEO14579 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.57■□□□□ 0.4
COPEO14579 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.57■□□□□ 0.4
COPEO14579 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.57■□□□□ 0.4
COPEO14579 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COPEO14579 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.57■□□□□ 0.4
COPEO14579 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.57■□□□□ 0.4
COPEO14579 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.57■□□□□ 0.4
COPEO14579 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.57■□□□□ 0.4
COPEO14579 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COPEO14579 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPEO14579 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPEO14579 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COPEO14579 AC116353.5-201ENST00000638148 1699 ntBASIC17.57■□□□□ 0.4
COPEO14579 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
COPEO14579 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPEO14579 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPEO14579 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPEO14579 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.57■□□□□ 0.4
COPEO14579 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.57■□□□□ 0.4
COPEO14579 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPEO14579 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
COPEO14579 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
COPEO14579 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPEO14579 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
COPEO14579 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COPEO14579 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
COPEO14579 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.56■□□□□ 0.4
COPEO14579 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPEO14579 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPEO14579 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPEO14579 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.56■□□□□ 0.4
COPEO14579 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPEO14579 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPEO14579 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPEO14579 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPEO14579 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPEO14579 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPEO14579 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
COPEO14579 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
COPEO14579 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPEO14579 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPEO14579 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPEO14579 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPEO14579 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.56■□□□□ 0.4
COPEO14579 AC005104.2-201ENST00000427818 678 ntBASIC17.56■□□□□ 0.4
COPEO14579 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.56■□□□□ 0.4
COPEO14579 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPEO14579 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.56■□□□□ 0.4
COPEO14579 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
COPEO14579 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.56■□□□□ 0.4
COPEO14579 AC024563.2-201ENST00000603282 481 ntBASIC17.56■□□□□ 0.4
COPEO14579 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.56■□□□□ 0.4
COPEO14579 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
COPEO14579 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
COPEO14579 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPEO14579 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPEO14579 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPEO14579 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
COPEO14579 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.56■□□□□ 0.4
COPEO14579 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms