Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TAF4O00268 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TAF4O00268 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TAF4O00268 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TAF4O00268 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TAF4O00268 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TAF4O00268 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.23■□□□□ 0.35
TAF4O00268 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.23■□□□□ 0.35
TAF4O00268 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TAF4O00268 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.22■□□□□ 0.35
TAF4O00268 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TAF4O00268 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TAF4O00268 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
TAF4O00268 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TAF4O00268 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TAF4O00268 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TAF4O00268 ZNF815P-204ENST00000434898 1737 ntBASIC17.22■□□□□ 0.35
TAF4O00268 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TAF4O00268 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TAF4O00268 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TAF4O00268 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TAF4O00268 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.22■□□□□ 0.35
TAF4O00268 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TAF4O00268 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.22■□□□□ 0.35
TAF4O00268 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
TAF4O00268 YBX1P5-201ENST00000509441 847 ntBASIC17.22■□□□□ 0.35
TAF4O00268 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.22■□□□□ 0.35
TAF4O00268 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.22■□□□□ 0.35
TAF4O00268 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TAF4O00268 MIR3180-4-201ENST00000582223 153 ntBASIC17.22■□□□□ 0.35
TAF4O00268 AC005336.2-201ENST00000593183 939 ntBASIC17.22■□□□□ 0.35
TAF4O00268 AC025062.2-201ENST00000605477 670 ntBASIC17.22■□□□□ 0.35
TAF4O00268 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TAF4O00268 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.22■□□□□ 0.35
TAF4O00268 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TAF4O00268 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.22■□□□□ 0.35
TAF4O00268 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.22■□□□□ 0.35
TAF4O00268 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TAF4O00268 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TAF4O00268 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
TAF4O00268 RCC2P3-201ENST00000418112 1537 ntBASIC17.21■□□□□ 0.35
TAF4O00268 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TAF4O00268 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
TAF4O00268 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.21■□□□□ 0.35
TAF4O00268 ABALON-201ENST00000629058 1903 ntBASIC17.21■□□□□ 0.35
TAF4O00268 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TAF4O00268 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TAF4O00268 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TAF4O00268 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.21■□□□□ 0.35
TAF4O00268 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TAF4O00268 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TAF4O00268 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TAF4O00268 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.21■□□□□ 0.35
TAF4O00268 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.21■□□□□ 0.35
TAF4O00268 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.21■□□□□ 0.35
TAF4O00268 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.21■□□□□ 0.35
TAF4O00268 AC254562.1-201ENST00000417586 456 ntBASIC17.21■□□□□ 0.35
TAF4O00268 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.21■□□□□ 0.35
TAF4O00268 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.21■□□□□ 0.35
TAF4O00268 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.21■□□□□ 0.35
TAF4O00268 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.21■□□□□ 0.35
TAF4O00268 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.21■□□□□ 0.35
TAF4O00268 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.21■□□□□ 0.35
TAF4O00268 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.21■□□□□ 0.35
TAF4O00268 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.21■□□□□ 0.35
TAF4O00268 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.21■□□□□ 0.35
TAF4O00268 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TAF4O00268 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TAF4O00268 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TAF4O00268 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TAF4O00268 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TAF4O00268 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TAF4O00268 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TAF4O00268 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.21■□□□□ 0.35
TAF4O00268 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TAF4O00268 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TAF4O00268 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
TAF4O00268 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
TAF4O00268 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TAF4O00268 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
TAF4O00268 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TAF4O00268 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TAF4O00268 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TAF4O00268 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
TAF4O00268 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TAF4O00268 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.2■□□□□ 0.34
TAF4O00268 AP002414.3-201ENST00000589352 1468 ntBASIC17.2■□□□□ 0.34
TAF4O00268 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TAF4O00268 AC009053.2-201ENST00000563701 2365 ntBASIC17.2■□□□□ 0.34
TAF4O00268 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.2■□□□□ 0.34
TAF4O00268 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.2■□□□□ 0.34
TAF4O00268 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.2■□□□□ 0.34
TAF4O00268 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.2■□□□□ 0.34
TAF4O00268 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TAF4O00268 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TAF4O00268 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.2■□□□□ 0.34
TAF4O00268 AP002472.1-201ENST00000577490 586 ntBASIC17.2■□□□□ 0.34
TAF4O00268 MIR4469-201ENST00000583919 79 ntBASIC17.2■□□□□ 0.34
TAF4O00268 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.2■□□□□ 0.34
TAF4O00268 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms