Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
AP3B1O00203 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
AP3B1O00203 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.75■□□□□ 0.43
AP3B1O00203 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP3B1O00203 FAM220CP-201ENST00000395253 831 ntBASIC17.75■□□□□ 0.43
AP3B1O00203 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
AP3B1O00203 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AP3B1O00203 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.75■□□□□ 0.43
AP3B1O00203 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.75■□□□□ 0.43
AP3B1O00203 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.75■□□□□ 0.43
AP3B1O00203 AL138831.2-201ENST00000606564 490 ntBASIC17.75■□□□□ 0.43
AP3B1O00203 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
AP3B1O00203 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.75■□□□□ 0.43
AP3B1O00203 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AP3B1O00203 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP3B1O00203 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AP3B1O00203 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.75■□□□□ 0.43
AP3B1O00203 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AP3B1O00203 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP3B1O00203 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP3B1O00203 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP3B1O00203 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
AP3B1O00203 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP3B1O00203 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
AP3B1O00203 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
AP3B1O00203 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP3B1O00203 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
AP3B1O00203 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
AP3B1O00203 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.74■□□□□ 0.43
AP3B1O00203 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.74■□□□□ 0.43
AP3B1O00203 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.74■□□□□ 0.43
AP3B1O00203 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
AP3B1O00203 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.74■□□□□ 0.43
AP3B1O00203 AC009533.2-201ENST00000543664 586 ntBASIC17.74■□□□□ 0.43
AP3B1O00203 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.74■□□□□ 0.43
AP3B1O00203 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.74■□□□□ 0.43
AP3B1O00203 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP3B1O00203 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
AP3B1O00203 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.74■□□□□ 0.43
AP3B1O00203 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.74■□□□□ 0.43
AP3B1O00203 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
AP3B1O00203 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.74■□□□□ 0.43
AP3B1O00203 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
AP3B1O00203 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP3B1O00203 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
AP3B1O00203 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.74■□□□□ 0.43
AP3B1O00203 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP3B1O00203 AC116353.5-201ENST00000638148 1699 ntBASIC17.74■□□□□ 0.43
AP3B1O00203 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP3B1O00203 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
AP3B1O00203 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP3B1O00203 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.73■□□□□ 0.43
AP3B1O00203 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
AP3B1O00203 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.73■□□□□ 0.43
AP3B1O00203 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
AP3B1O00203 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
AP3B1O00203 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.73■□□□□ 0.43
AP3B1O00203 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
AP3B1O00203 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
AP3B1O00203 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
AP3B1O00203 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.73■□□□□ 0.43
AP3B1O00203 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.73■□□□□ 0.43
AP3B1O00203 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.73■□□□□ 0.43
AP3B1O00203 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.73■□□□□ 0.43
AP3B1O00203 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.73■□□□□ 0.43
AP3B1O00203 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.73■□□□□ 0.43
AP3B1O00203 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
AP3B1O00203 AL121672.3-201ENST00000608644 468 ntBASIC17.73■□□□□ 0.43
AP3B1O00203 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
AP3B1O00203 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
AP3B1O00203 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
AP3B1O00203 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
AP3B1O00203 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
AP3B1O00203 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
AP3B1O00203 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
AP3B1O00203 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
AP3B1O00203 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
AP3B1O00203 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
AP3B1O00203 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.73■□□□□ 0.43
AP3B1O00203 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
AP3B1O00203 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.73■□□□□ 0.43
AP3B1O00203 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
AP3B1O00203 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP3B1O00203 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.72■□□□□ 0.43
AP3B1O00203 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP3B1O00203 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP3B1O00203 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.72■□□□□ 0.43
AP3B1O00203 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP3B1O00203 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.72■□□□□ 0.43
AP3B1O00203 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP3B1O00203 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
AP3B1O00203 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP3B1O00203 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP3B1O00203 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP3B1O00203 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.72■□□□□ 0.43
AP3B1O00203 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP3B1O00203 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP3B1O00203 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP3B1O00203 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
AP3B1O00203 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms