Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 SDHAP2-201ENST00000455183 2001 ntBASIC17.27■□□□□ 0.36
TMX2-CTNND1H3BSU7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMX2-CTNND1H3BSU7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.27■□□□□ 0.36
TMX2-CTNND1H3BSU7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TMX2-CTNND1H3BSU7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TMX2-CTNND1H3BSU7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.27■□□□□ 0.36
TMX2-CTNND1H3BSU7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.27■□□□□ 0.36
TMX2-CTNND1H3BSU7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.27■□□□□ 0.36
TMX2-CTNND1H3BSU7 AC139530.3-201ENST00000620344 690 ntBASIC17.27■□□□□ 0.36
TMX2-CTNND1H3BSU7 AC148477.8-201ENST00000624298 468 ntBASIC17.27■□□□□ 0.36
TMX2-CTNND1H3BSU7 FAM215A-202ENST00000632077 792 ntBASIC17.27■□□□□ 0.36
TMX2-CTNND1H3BSU7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.27■□□□□ 0.36
TMX2-CTNND1H3BSU7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.27■□□□□ 0.36
TMX2-CTNND1H3BSU7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.27■□□□□ 0.36
TMX2-CTNND1H3BSU7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TMX2-CTNND1H3BSU7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TMX2-CTNND1H3BSU7 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
TMX2-CTNND1H3BSU7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMX2-CTNND1H3BSU7 AC125634.1-201ENST00000438758 1403 ntBASIC17.27■□□□□ 0.35
TMX2-CTNND1H3BSU7 AP005117.1-201ENST00000584346 1413 ntBASIC17.27■□□□□ 0.35
TMX2-CTNND1H3BSU7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.27■□□□□ 0.35
TMX2-CTNND1H3BSU7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
TMX2-CTNND1H3BSU7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
TMX2-CTNND1H3BSU7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMX2-CTNND1H3BSU7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
TMX2-CTNND1H3BSU7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMX2-CTNND1H3BSU7 ANO7L1-203ENST00000602586 1720 ntBASIC17.27■□□□□ 0.35
TMX2-CTNND1H3BSU7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
TMX2-CTNND1H3BSU7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMX2-CTNND1H3BSU7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 AC012317.2-201ENST00000623305 2251 ntBASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 SIRPAP1-201ENST00000448467 1770 ntBASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 ABCD1P5-201ENST00000445663 754 ntBASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMX2-CTNND1H3BSU7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
TMX2-CTNND1H3BSU7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
TMX2-CTNND1H3BSU7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
TMX2-CTNND1H3BSU7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TMX2-CTNND1H3BSU7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMX2-CTNND1H3BSU7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMX2-CTNND1H3BSU7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.25■□□□□ 0.35
TMX2-CTNND1H3BSU7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.25■□□□□ 0.35
TMX2-CTNND1H3BSU7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TMX2-CTNND1H3BSU7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.25■□□□□ 0.35
TMX2-CTNND1H3BSU7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TMX2-CTNND1H3BSU7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.25■□□□□ 0.35
TMX2-CTNND1H3BSU7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMX2-CTNND1H3BSU7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.25■□□□□ 0.35
TMX2-CTNND1H3BSU7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.25■□□□□ 0.35
TMX2-CTNND1H3BSU7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.25■□□□□ 0.35
TMX2-CTNND1H3BSU7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMX2-CTNND1H3BSU7 SLC25A1P1-201ENST00000528351 927 ntBASIC17.25■□□□□ 0.35
TMX2-CTNND1H3BSU7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.25■□□□□ 0.35
TMX2-CTNND1H3BSU7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.25■□□□□ 0.35
TMX2-CTNND1H3BSU7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.25■□□□□ 0.35
TMX2-CTNND1H3BSU7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.25■□□□□ 0.35
TMX2-CTNND1H3BSU7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.25■□□□□ 0.35
TMX2-CTNND1H3BSU7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.25■□□□□ 0.35
TMX2-CTNND1H3BSU7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.25■□□□□ 0.35
TMX2-CTNND1H3BSU7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TMX2-CTNND1H3BSU7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.25■□□□□ 0.35
TMX2-CTNND1H3BSU7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMX2-CTNND1H3BSU7 AC243591.1-201ENST00000452967 1364 ntBASIC17.25■□□□□ 0.35
TMX2-CTNND1H3BSU7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TMX2-CTNND1H3BSU7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.25■□□□□ 0.35
TMX2-CTNND1H3BSU7 CICP6-201ENST00000457191 2729 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms