Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
NACAE9PAV3 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
NACAE9PAV3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC12.89□□□□□ -0.35
NACAE9PAV3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC12.89□□□□□ -0.35
NACAE9PAV3 FXN-203ENST00000396366 922 ntTSL 2 BASIC12.89□□□□□ -0.35
NACAE9PAV3 KRT18P56-201ENST00000507275 550 ntBASIC12.89□□□□□ -0.35
NACAE9PAV3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC12.89□□□□□ -0.35
NACAE9PAV3 MIR3180-4-201ENST00000582223 153 ntBASIC12.89□□□□□ -0.35
NACAE9PAV3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
NACAE9PAV3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
NACAE9PAV3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
NACAE9PAV3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC12.88□□□□□ -0.35
NACAE9PAV3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NACAE9PAV3 AL355312.1-201ENST00000407115 2176 ntBASIC12.88□□□□□ -0.35
NACAE9PAV3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NACAE9PAV3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NACAE9PAV3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
NACAE9PAV3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC12.88□□□□□ -0.35
NACAE9PAV3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NACAE9PAV3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NACAE9PAV3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC12.88□□□□□ -0.35
NACAE9PAV3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC12.88□□□□□ -0.35
NACAE9PAV3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
NACAE9PAV3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NACAE9PAV3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
NACAE9PAV3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NACAE9PAV3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NACAE9PAV3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NACAE9PAV3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC12.88□□□□□ -0.35
NACAE9PAV3 HES2-202ENST00000377836 507 ntTSL 2 BASIC12.88□□□□□ -0.35
NACAE9PAV3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC12.88□□□□□ -0.35
NACAE9PAV3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC12.88□□□□□ -0.35
NACAE9PAV3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC12.88□□□□□ -0.35
NACAE9PAV3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NACAE9PAV3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NACAE9PAV3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC12.88□□□□□ -0.35
NACAE9PAV3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
NACAE9PAV3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC12.88□□□□□ -0.35
NACAE9PAV3 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NACAE9PAV3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NACAE9PAV3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC12.88□□□□□ -0.35
NACAE9PAV3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
NACAE9PAV3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
NACAE9PAV3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC12.88□□□□□ -0.35
NACAE9PAV3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NACAE9PAV3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NACAE9PAV3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC12.87□□□□□ -0.35
NACAE9PAV3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NACAE9PAV3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NACAE9PAV3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
NACAE9PAV3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
NACAE9PAV3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NACAE9PAV3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NACAE9PAV3 PVRIG2P-201ENST00000435460 978 ntBASIC12.87□□□□□ -0.35
NACAE9PAV3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
NACAE9PAV3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC12.87□□□□□ -0.35
NACAE9PAV3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC12.87□□□□□ -0.35
NACAE9PAV3 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC12.87□□□□□ -0.35
NACAE9PAV3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC12.87□□□□□ -0.35
NACAE9PAV3 AC140113.3-201ENST00000605663 199 ntBASIC12.87□□□□□ -0.35
NACAE9PAV3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NACAE9PAV3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC12.87□□□□□ -0.35
NACAE9PAV3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC12.87□□□□□ -0.35
NACAE9PAV3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NACAE9PAV3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NACAE9PAV3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NACAE9PAV3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
NACAE9PAV3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
NACAE9PAV3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NACAE9PAV3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NACAE9PAV3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC12.87□□□□□ -0.35
NACAE9PAV3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
NACAE9PAV3 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
NACAE9PAV3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NACAE9PAV3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
NACAE9PAV3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NACAE9PAV3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
NACAE9PAV3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC12.87□□□□□ -0.35
NACAE9PAV3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
NACAE9PAV3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC12.87□□□□□ -0.35
NACAE9PAV3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC12.87□□□□□ -0.35
NACAE9PAV3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC12.87□□□□□ -0.35
NACAE9PAV3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NACAE9PAV3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NACAE9PAV3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC12.87□□□□□ -0.35
NACAE9PAV3 KRT18P48-201ENST00000434763 852 ntBASIC12.87□□□□□ -0.35
NACAE9PAV3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
NACAE9PAV3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC12.87□□□□□ -0.35
NACAE9PAV3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC12.87□□□□□ -0.35
NACAE9PAV3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC12.87□□□□□ -0.35
NACAE9PAV3 AC024243.1-201ENST00000609234 778 ntBASIC12.87□□□□□ -0.35
NACAE9PAV3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC12.87□□□□□ -0.35
NACAE9PAV3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC12.87□□□□□ -0.35
NACAE9PAV3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NACAE9PAV3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NACAE9PAV3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NACAE9PAV3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NACAE9PAV3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC12.86□□□□□ -0.35
NACAE9PAV3 KRT89P-201ENST00000620027 1478 ntBASIC12.86□□□□□ -0.35
NACAE9PAV3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms