Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COL6A6A6NMZ7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL6A6A6NMZ7 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.72■□□□□ 0.11
COL6A6A6NMZ7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL6A6A6NMZ7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC15.72■□□□□ 0.11
COL6A6A6NMZ7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COL6A6A6NMZ7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COL6A6A6NMZ7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
COL6A6A6NMZ7 AL355306.1-201ENST00000415580 579 ntBASIC15.72■□□□□ 0.11
COL6A6A6NMZ7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL6A6A6NMZ7 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
COL6A6A6NMZ7 ACTL9-202ENST00000612068 1252 ntBASIC15.72■□□□□ 0.11
COL6A6A6NMZ7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC15.72■□□□□ 0.11
COL6A6A6NMZ7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COL6A6A6NMZ7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.72■□□□□ 0.11
COL6A6A6NMZ7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COL6A6A6NMZ7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.72■□□□□ 0.11
COL6A6A6NMZ7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
COL6A6A6NMZ7 AC004945.1-201ENST00000416738 983 ntBASIC15.71■□□□□ 0.11
COL6A6A6NMZ7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.71■□□□□ 0.11
COL6A6A6NMZ7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.71■□□□□ 0.11
COL6A6A6NMZ7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
COL6A6A6NMZ7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.71■□□□□ 0.11
COL6A6A6NMZ7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
COL6A6A6NMZ7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.71■□□□□ 0.11
COL6A6A6NMZ7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL6A6A6NMZ7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL6A6A6NMZ7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
COL6A6A6NMZ7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL6A6A6NMZ7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COL6A6A6NMZ7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL6A6A6NMZ7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COL6A6A6NMZ7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
COL6A6A6NMZ7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL6A6A6NMZ7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COL6A6A6NMZ7 AC018445.3-201ENST00000624177 1945 ntBASIC15.71■□□□□ 0.11
COL6A6A6NMZ7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COL6A6A6NMZ7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.71■□□□□ 0.11
COL6A6A6NMZ7 KRT17P7-201ENST00000451704 1104 ntBASIC15.71■□□□□ 0.11
COL6A6A6NMZ7 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.71■□□□□ 0.11
COL6A6A6NMZ7 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.71■□□□□ 0.11
COL6A6A6NMZ7 AL158211.3-201ENST00000607385 239 ntBASIC15.71■□□□□ 0.11
COL6A6A6NMZ7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
COL6A6A6NMZ7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
COL6A6A6NMZ7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL6A6A6NMZ7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL6A6A6NMZ7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
COL6A6A6NMZ7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.71■□□□□ 0.1
COL6A6A6NMZ7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
COL6A6A6NMZ7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.71■□□□□ 0.1
COL6A6A6NMZ7 AC097637.2-201ENST00000624096 1997 ntBASIC15.71■□□□□ 0.1
COL6A6A6NMZ7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
COL6A6A6NMZ7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.71■□□□□ 0.1
COL6A6A6NMZ7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
COL6A6A6NMZ7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
COL6A6A6NMZ7 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL6A6A6NMZ7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.7■□□□□ 0.1
COL6A6A6NMZ7 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COL6A6A6NMZ7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.7■□□□□ 0.1
COL6A6A6NMZ7 FAM185BP-201ENST00000443595 716 ntBASIC15.7■□□□□ 0.1
COL6A6A6NMZ7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.7■□□□□ 0.1
COL6A6A6NMZ7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.7■□□□□ 0.1
COL6A6A6NMZ7 AC106886.1-201ENST00000568660 600 ntBASIC15.7■□□□□ 0.1
COL6A6A6NMZ7 AC019129.2-201ENST00000609837 1235 ntBASIC15.7■□□□□ 0.1
COL6A6A6NMZ7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC15.7■□□□□ 0.1
COL6A6A6NMZ7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
COL6A6A6NMZ7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC15.7■□□□□ 0.1
COL6A6A6NMZ7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL6A6A6NMZ7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL6A6A6NMZ7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
COL6A6A6NMZ7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL6A6A6NMZ7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
COL6A6A6NMZ7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.7■□□□□ 0.1
COL6A6A6NMZ7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.7■□□□□ 0.1
COL6A6A6NMZ7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL6A6A6NMZ7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.7■□□□□ 0.1
COL6A6A6NMZ7 ACTG1P4-201ENST00000425123 1122 ntBASIC15.7■□□□□ 0.1
COL6A6A6NMZ7 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.7■□□□□ 0.1
COL6A6A6NMZ7 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.7■□□□□ 0.1
COL6A6A6NMZ7 AC026120.1-201ENST00000611536 926 ntBASIC15.7■□□□□ 0.1
COL6A6A6NMZ7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
COL6A6A6NMZ7 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.7■□□□□ 0.1
COL6A6A6NMZ7 AL590560.3-201ENST00000623350 461 ntBASIC15.7■□□□□ 0.1
COL6A6A6NMZ7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
COL6A6A6NMZ7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
COL6A6A6NMZ7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COL6A6A6NMZ7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL6A6A6NMZ7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
COL6A6A6NMZ7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL6A6A6NMZ7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL6A6A6NMZ7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL6A6A6NMZ7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
COL6A6A6NMZ7 AC140658.5-201ENST00000438532 169 ntBASIC15.69■□□□□ 0.1
COL6A6A6NMZ7 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.69■□□□□ 0.1
COL6A6A6NMZ7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.69■□□□□ 0.1
COL6A6A6NMZ7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.69■□□□□ 0.1
COL6A6A6NMZ7 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.69■□□□□ 0.1
COL6A6A6NMZ7 AL033527.4-201ENST00000641026 673 ntBASIC15.69■□□□□ 0.1
COL6A6A6NMZ7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
COL6A6A6NMZ7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms