Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RCCD1A6NED2 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RCCD1A6NED2 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RCCD1A6NED2 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RCCD1A6NED2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RCCD1A6NED2 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
RCCD1A6NED2 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.68■□□□□ 0.58
RCCD1A6NED2 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
RCCD1A6NED2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RCCD1A6NED2 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
RCCD1A6NED2 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.67■□□□□ 0.58
RCCD1A6NED2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RCCD1A6NED2 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.67■□□□□ 0.58
RCCD1A6NED2 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RCCD1A6NED2 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.67■□□□□ 0.58
RCCD1A6NED2 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RCCD1A6NED2 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RCCD1A6NED2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.67■□□□□ 0.58
RCCD1A6NED2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.67■□□□□ 0.58
RCCD1A6NED2 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.67■□□□□ 0.58
RCCD1A6NED2 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RCCD1A6NED2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RCCD1A6NED2 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RCCD1A6NED2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.67■□□□□ 0.58
RCCD1A6NED2 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.67■□□□□ 0.58
RCCD1A6NED2 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.67■□□□□ 0.58
RCCD1A6NED2 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
RCCD1A6NED2 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RCCD1A6NED2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RCCD1A6NED2 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.67■□□□□ 0.58
RCCD1A6NED2 CICP6-201ENST00000457191 2729 ntBASIC18.67■□□□□ 0.58
RCCD1A6NED2 AC092068.3-201ENST00000587894 2016 ntBASIC18.67■□□□□ 0.58
RCCD1A6NED2 DOC2GP-204ENST00000639052 2548 ntBASIC18.67■□□□□ 0.58
RCCD1A6NED2 AL139384.1-201ENST00000612143 3047 ntBASIC18.67■□□□□ 0.58
RCCD1A6NED2 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RCCD1A6NED2 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.67■□□□□ 0.58
RCCD1A6NED2 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RCCD1A6NED2 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.67■□□□□ 0.58
RCCD1A6NED2 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RCCD1A6NED2 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RCCD1A6NED2 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RCCD1A6NED2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RCCD1A6NED2 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RCCD1A6NED2 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RCCD1A6NED2 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RCCD1A6NED2 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RCCD1A6NED2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.66■□□□□ 0.58
RCCD1A6NED2 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.66■□□□□ 0.58
RCCD1A6NED2 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RCCD1A6NED2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RCCD1A6NED2 SLC25A3P1-201ENST00000443844 931 ntBASIC18.66■□□□□ 0.58
RCCD1A6NED2 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RCCD1A6NED2 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.66■□□□□ 0.58
RCCD1A6NED2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.66■□□□□ 0.58
RCCD1A6NED2 AC010203.1-204ENST00000548782 407 ntBASIC18.66■□□□□ 0.58
RCCD1A6NED2 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.66■□□□□ 0.58
RCCD1A6NED2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.66■□□□□ 0.58
RCCD1A6NED2 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RCCD1A6NED2 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.66■□□□□ 0.58
RCCD1A6NED2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.66■□□□□ 0.58
RCCD1A6NED2 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RCCD1A6NED2 KRT18P22-201ENST00000402024 1347 ntBASIC18.66■□□□□ 0.58
RCCD1A6NED2 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RCCD1A6NED2 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.66■□□□□ 0.58
RCCD1A6NED2 AC046158.3-201ENST00000624947 2558 ntBASIC18.66■□□□□ 0.58
RCCD1A6NED2 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RCCD1A6NED2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RCCD1A6NED2 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RCCD1A6NED2 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.66■□□□□ 0.58
RCCD1A6NED2 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCCD1A6NED2 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.65■□□□□ 0.58
RCCD1A6NED2 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCCD1A6NED2 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCCD1A6NED2 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.65■□□□□ 0.58
RCCD1A6NED2 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.65■□□□□ 0.58
RCCD1A6NED2 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCCD1A6NED2 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCCD1A6NED2 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RCCD1A6NED2 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCCD1A6NED2 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RCCD1A6NED2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCCD1A6NED2 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.65■□□□□ 0.58
RCCD1A6NED2 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCCD1A6NED2 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCCD1A6NED2 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RCCD1A6NED2 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCCD1A6NED2 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCCD1A6NED2 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RCCD1A6NED2 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.65■□□□□ 0.58
RCCD1A6NED2 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.65■□□□□ 0.58
RCCD1A6NED2 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.65■□□□□ 0.58
RCCD1A6NED2 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCCD1A6NED2 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCCD1A6NED2 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
RCCD1A6NED2 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.65■□□□□ 0.58
RCCD1A6NED2 AL353692.3-201ENST00000407031 1396 ntBASIC18.65■□□□□ 0.58
RCCD1A6NED2 AL603756.1-201ENST00000606511 2163 ntBASIC18.65■□□□□ 0.58
RCCD1A6NED2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCCD1A6NED2 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCCD1A6NED2 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms